RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TSPAN6O43657 245 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 TULP3O75386 442 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 TRMUO75648 421 aaKnown RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 FTH1P02794 183 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 MT-ND1P03886 318 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 IL6P05231 212 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 SRPRAP08240 638 aaKnown RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ELFN1P0C7U0 828 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 CDH15P55291 814 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 AP1S2P56377 157 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ABRQ12979 859 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ZNF284Q2VY69 593 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 PSRC1Q6PGN9 363 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 TTC33Q6PID6 262 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 NEK10Q6ZWH5 1172 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 RASGRP3Q8IV61 690 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 RAVER1Q8IY67 606 aaKnown RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ZNF786Q8N393 782 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 C12orf76Q8N812 135 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 GLB1L3Q8NCI6 653 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ST13P5Q8NFI4 369 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 NXPE3Q969Y0 559 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ZFYVE19Q96K21 471 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ZNF583Q96ND8 569 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 SEPHS2Q99611 448 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 IKZF5Q9H5V7 419 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 SLC25A37Q9NYZ2 338 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 NFKBIL1Q9UBC1 381 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 MAGEL2Q9UJ55 1249 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 SNX6Q9UNH7 406 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 TRANK1O15050 2925 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 REV3LO60673 3130 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 PRRT4C9JH25 899 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 KPNA3O00505 521 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 CLGNO14967 610 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 LDLRP01130 860 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 PHC1P78364 1004 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ACOX1Q15067 660 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 MSRB3Q8IXL7 192 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 RNF175Q8N4F7 328 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 OR8J3Q8NGG0 315 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ADAMTS16Q8TE57 1224 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 GLYATL1Q969I3 302 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 TIFAQ96CG3 184 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 LRIG1Q96JA1 1093 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 WRAP53Q9BUR4 548 aaKnown RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 DNAJC11Q9NVH1 559 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 SMPD3Q9NY59 655 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ZNF639Q9UID6 485 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 ANKRD33BA6NCL7 494 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 OTOL1A6NHN0 477 aaPredicted RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 ARHGEF33A8MVX0 844 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 TACR1P25103 407 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 NFKBIAP25963 317 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 PREPP48147 710 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 RPS14P62263 151 aaKnown RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 TMEM115Q12893 351 aaPredicted RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 PYCR3Q53H96 274 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 DNAJC14Q6Y2X3 702 aaPredicted RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 LPCAT2Q7L5N7 544 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 SLC22A15Q8IZD6 547 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 CYGBQ8WWM9 190 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 AP2M1Q96CW1 435 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 NSMCE2Q96MF7 247 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 VPS35Q96QK1 796 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 OR52E6Q96RD3 313 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 CHID1Q9BWS9 393 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 SLC6A13Q9NSD5 602 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 ETAA1Q9NY74 926 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 CIDEBQ9UHD4 219 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 COQ6Q9Y2Z9 468 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 UNC80Q8N2C7 3258 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 CLOCKO15516 846 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 HOXC11O43248 304 aaPredicted RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 SPINT1O43278 529 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 PSIP1O75475 530 aaKnown RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 GSTM1P09488 218 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 HLA-EP13747 358 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 RPL10P27635 214 aaKnown RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 HALP42357 657 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 RPS9P46781 194 aaKnown RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 SLC6A11P48066 632 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 GSTM4Q03013 218 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 CHIT1Q13231 466 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 GTDC1Q4AE62 458 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 CCSMST1Q4G0I0 132 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 LDLRAP1Q5SW96 308 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 GALNT13Q8IUC8 556 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 ERI1Q8IV48 349 aaKnown RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 DHRSXQ8N5I4 330 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 OR10A6Q8NH74 314 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 BPIFB1Q8TDL5 484 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms