RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ZNF99A8MXY4 864 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 STX16-NPEPL1H3BU86 382 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 IFRD1O00458 451 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 SDHDO14521 159 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ACOX3O15254 700 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SEPT4O43236 478 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 MSI1O43347 362 aaKnown RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 UGT2B11O75310 529 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 DUSP11O75319 330 aaKnown RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 TOX4O94842 621 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SEC24AO95486 1093 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 AP2A1O95782 977 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 PRKCGP05129 697 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 THRBP10828 461 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 GYPEP15421 78 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 HOXB8P17481 243 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 TGM1P22735 817 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CTSSP25774 331 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CST5P28325 142 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 S100A5P33763 92 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 RFC2P35250 354 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 MSX2P35548 267 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 OPRL1P41146 370 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 KIR2DL3P43628 341 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ACADSBP45954 432 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ALDH3A2P51648 485 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 AIF1P55008 147 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 TPTEP56180 551 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 RAB10P61026 200 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CSNK2BP67870 215 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ADAM17P78536 824 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ADARB1P78563 741 aaKnown RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 ZNF45Q02386 682 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 DMPKQ09013 629 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 FCHO2Q0JRZ9 810 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CYP51A1Q16850 503 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CDO1Q16878 200 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 GAGE13Q4V321 117 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 FAM98BQ52LJ0 330 aaKnown RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 ZNF484Q5JVG2 852 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 MFSD4BQ5TF39 518 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 BSPRYQ5W0U4 402 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 HMBOX1Q6NT76 420 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 UGT3A1Q6NUS8 523 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SWSAP1Q6NVH7 229 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 C8orf82Q6P1X6 216 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 LCLAT1Q6UWP7 414 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 NAPRTQ6XQN6 538 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 USP51Q70EK9 711 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 TAS2R42Q7RTR8 314 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 PRSS48Q7RTY5 328 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 PLPPR4Q7Z2D5 763 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SPATA19Q7Z5L4 167 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 TMEM135Q86UB9 458 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 TLK2Q86UE8 772 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CDR2LQ86X02 465 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 PLD3Q8IV08 490 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 IQCF2Q8IXL9 164 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CADM3Q8N126 398 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 BCL6BQ8N143 479 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 CLEC4FQ8N1N0 589 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SCML4Q8N228 414 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ELMOD1Q8N336 334 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CAMKK1Q8N5S9 505 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 DNAJC5GQ8N7S2 189 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ARL10Q8N8L6 244 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ANKRD53Q8N9V6 530 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SIMC1Q8NDZ2 872 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ANGPTL6Q8NI99 470 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SPPL2BQ8TCT7 592 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 RAET1EQ8TD07 263 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 MAGEE2Q8TD90 523 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 SNX33Q8WV41 574 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CAPSLQ8WWF8 208 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ATL1Q8WXF7 558 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SNX19Q92543 992 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 RORBQ92753 470 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 RELTQ969Z4 430 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 BTN2A3PQ96KV6 586 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SPATA33Q96N06 139 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 SNX18Q96RF0 628 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 PEBP4Q96S96 227 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 GPR20Q99678 358 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ACO2Q99798 780 aaKnown RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 KCTD14Q9BQ13 255 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 SNRNP25Q9BV90 132 aaKnown RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 KATNAL1Q9BW62 490 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 UGT2B28Q9BY64 529 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 RPF1Q9H9Y2 349 aaKnown RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 PLEKHA5Q9HAU0 1116 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 DMRT3Q9NQL9 472 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 TLR9Q9NR96 1032 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ERAP1Q9NZ08 941 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 FLRT1Q9NZU1 646 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 CCDC167Q9P0B6 97 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 KLHL8Q9P2G9 620 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 ABCD2Q9UBJ2 740 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 ZDHHC2Q9UIJ5 367 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 STAP1Q9ULZ2 295 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 OAZ3Q9UMX2 235 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms