RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 LMF1Q96S06 567 aa14.3□□□□□ -0.12
CTSB-230ENST00000534149 FERMT1Q9BQL6 677 aa14.3□□□□□ -0.12
CTSB-230ENST00000534149 CRB3Q9BUF7 120 aa14.3□□□□□ -0.12
CTSB-230ENST00000534149 ARNT2Q9HBZ2 717 aa14.3□□□□□ -0.12
CTSB-230ENST00000534149 IGSF5Q9NSI5 407 aa14.3□□□□□ -0.12
CTSB-230ENST00000534149 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.3□□□□□ -0.12
CTSB-230ENST00000534149 IMPACTQ9P2X3 320 aa14.3□□□□□ -0.12
CTSB-230ENST00000534149 FEZ2Q9UHY8 353 aaPredicted RBP14.3□□□□□ -0.12
CTSB-230ENST00000534149 SETD2Q9BYW2 2564 aaPredicted RBP14.3□□□□□ -0.12
CTSB-230ENST00000534149 TRGV8A0A0C4DH27 118 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 OR51F1A6NGY5 319 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 VSTM2BA6NLU5 285 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 QSOX1O00391 747 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 KDM1AO60341 852 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 STK10O94804 968 aaKnown RBP14.29□□□□□ -0.12
CTSB-230ENST00000534149 HPP00738 406 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 ACPPP15309 386 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 PTGER4P35408 488 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 RAB28P51157 221 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 EIF3EP60228 445 aaKnown RBP14.29□□□□□ -0.12
CTSB-230ENST00000534149 SRSF11Q05519 484 aaKnown RBP14.29□□□□□ -0.12
CTSB-230ENST00000534149 TRIM14Q14142 442 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 ITIH4Q14624 930 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 GRM7Q14831 915 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 POU6F1Q14863 301 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 FIGLAQ6QHK4 219 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 GFRALQ6UXV0 394 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 TTC29Q8NA56 475 aaPredicted RBP14.29□□□□□ -0.12
CTSB-230ENST00000534149 C8orf44Q96CB5 159 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 CCDC120Q96HB5 630 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 IL17FQ96PD4 163 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 SELENOSQ9BQE4 189 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 MENTQ9BUN1 341 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
CTSB-230ENST00000534149 PLA2G3Q9NZ20 509 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 SUCOQ9UBS9 1254 aaKnown RBP14.29□□□□□ -0.12
CTSB-230ENST00000534149 INTUQ9ULD6 942 aa14.29□□□□□ -0.12
CTSB-230ENST00000534149 DYTNA2CJ06 578 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 MAP2K7O14733 419 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 MED26O95402 600 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 TPM3P06753 285 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 RBP3P10745 1247 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 HTR1EP28566 365 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 KLC1Q07866 573 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 ZC3H12BQ5HYM0 836 aaKnown RBP14.28□□□□□ -0.12
CTSB-230ENST00000534149 TCTE1Q5JU00 501 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 YOD1Q5VVQ6 348 aaPredicted RBP14.28□□□□□ -0.12
CTSB-230ENST00000534149 DARS2Q6PI48 645 aaKnown RBP14.28□□□□□ -0.12
CTSB-230ENST00000534149 PACS1Q6VY07 963 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 BNC2Q6ZN30 1099 aaPredicted RBP14.28□□□□□ -0.12
CTSB-230ENST00000534149 MED13LQ71F56 2210 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 NLRP9Q7RTR0 991 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 MRGPRGQ86SM5 289 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 STYXQ8WUJ0 223 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 LRRC45Q96CN5 670 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 LUC7LQ9NQ29 371 aaKnown RBP14.28□□□□□ -0.12
CTSB-230ENST00000534149 INTS7Q9NVH2 962 aaKnown RBP14.28□□□□□ -0.12
CTSB-230ENST00000534149 PTGFRNQ9P2B2 879 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 SH3BGRL2Q9UJC5 107 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 ITGB1BP2Q9UKP3 347 aa14.28□□□□□ -0.12
CTSB-230ENST00000534149 TRAV17A0A0B4J275 112 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 CCL21O00585 134 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 PJA2O43164 708 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 OR1I1O60431 355 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 MFAP3LO75121 409 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 USP1O94782 785 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 S1PR4O95977 384 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 F10P00742 488 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 OR56A5P0C7T3 313 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 COX6B1P14854 86 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 CD9P21926 228 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 MSNP26038 577 aaKnown RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 CTNNA2P26232 953 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 FOXN2P32314 431 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 SOX11P35716 441 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 CARSP49589 748 aaKnown RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 TNFSF10P50591 281 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 HADHBP55084 474 aaKnown RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 VSX2P58304 361 aaPredicted RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 PLOD1Q02809 727 aaPredicted RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 SF1Q15637 639 aaKnown RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 INAQ16352 499 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 DNAJC21Q5F1R6 531 aaKnown RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 ARHGEF18Q6ZSZ5 1173 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 VRK3Q8IV63 474 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 KLHDC8BQ8IXV7 354 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 KBTBD2Q8IY47 623 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 ZNF808Q8N4W9 903 aaPredicted RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 SIRT6Q8N6T7 355 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 CFAP61Q8NHU2 1237 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 STT3BQ8TCJ2 826 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 BRIX1Q8TDN6 353 aaKnown RBP14.27□□□□□ -0.13
CTSB-230ENST00000534149 PSMF1Q92530 271 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 SLC22A18Q96BI1 424 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 MIEF2Q96C03 454 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 ZNF285Q96NJ3 590 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 PPP1R2P1Q96PQ5 205 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 CHST11Q9NPF2 352 aa14.27□□□□□ -0.13
CTSB-230ENST00000534149 IL1RAPL1Q9NZN1 696 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms