RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PCDHB3Q9Y5E6 796 aa9.26□□□□□ -0.93
SSBP3-215ENST00000533946 MAD1L1Q9Y6D9 718 aa9.26□□□□□ -0.93
SSBP3-215ENST00000533946 SCN2AQ99250 2005 aa9.26□□□□□ -0.93
SSBP3-215ENST00000533946 SCN3AQ9NY46 2000 aa9.26□□□□□ -0.93
SSBP3-215ENST00000533946 PTPN13Q12923 2485 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 FAM237BA0A1B0GVD1 139 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CTAGE15A4D2H0 777 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 SDR42E2A6NKP2 422 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 TTI1O43156 1089 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 ZNF189O75820 626 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-215ENST00000533946 OR2B3O76000 313 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 MATN4O95460 622 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 APOA4P06727 396 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 UMODP07911 640 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 PKMP14618 531 aaKnown RBP9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CHRM3P20309 590 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CYP2A7P20853 494 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 OR1D4P47884 311 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CCL11P51671 97 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CDKN2DP55273 166 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 ATP1A4Q13733 1029 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 UGT8Q16880 541 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 NADK2Q4G0N4 442 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 DNAJC21Q5F1R6 531 aaKnown RBP9.25□□□□□ -0.93
SSBP3-215ENST00000533946 TMTC4Q5T4D3 741 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 MLIPQ5VWP3 458 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 FBXO42Q6P3S6 717 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 OTOAQ7RTW8 1153 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CTAGE6Q86UF2 777 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 DCUN1D3Q8IWE4 304 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 LRRC56Q8IYG6 542 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CPNE9Q8IYJ1 553 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 MCUQ8NE86 351 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 OR2L8Q8NGY9 312 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 APOBEC4Q8WW27 367 aaKnown RBP9.25□□□□□ -0.93
SSBP3-215ENST00000533946 MAIP1Q8WWC4 291 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 PEX13Q92968 403 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 CCDC138Q96M89 665 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 GPR21Q99679 349 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 C20orf96Q9NUD7 363 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-215ENST00000533946 OR6C2Q9NZP2 312 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 GNPTGQ9UJJ9 305 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 ANAPC5Q9UJX4 755 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 TCFL5Q9UL49 500 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 MAN2B2Q9Y2E5 1009 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 MRPS2Q9Y399 296 aaKnown RBP9.25□□□□□ -0.93
SSBP3-215ENST00000533946 LRRK2Q5S007 2527 aa9.25□□□□□ -0.93
SSBP3-215ENST00000533946 SHANK1Q9Y566 2161 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 DOPEY2Q9Y3R5 2298 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 A0A0J9YVX5 310 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 E7EQ34 232 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 DNALI1O14645 258 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-215ENST00000533946 P2RX6O15547 441 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 GSTM1P09488 218 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 OTX2P32243 289 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 VSX2P58304 361 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-215ENST00000533946 GNG11P61952 73 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 CDK16Q00536 496 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 GSTM4Q03013 218 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 PTK6Q13882 451 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 CRYMQ14894 314 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 NCF4Q15080 339 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 SF1Q15637 639 aaKnown RBP9.24□□□□□ -0.93
SSBP3-215ENST00000533946 SLC5A12Q1EHB4 618 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 BBS9Q3SYG4 887 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 UBAP2Q5T6F2 1119 aaKnown RBP9.24□□□□□ -0.93
SSBP3-215ENST00000533946 IZUMO3Q5VZ72 239 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 TMEM207Q6UWW9 146 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 UNC5DQ6UXZ4 953 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 OR2L3Q8NG85 312 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 C9orf43Q8TAL5 461 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-215ENST00000533946 CD200R1Q8TD46 325 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 CFAP36Q96G28 342 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 TCTN2Q96GX1 697 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 NUDT9Q9BW91 350 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 NLNQ9BYT8 704 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 TRIM31Q9BZY9 425 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 FAM117AQ9C073 453 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 CUEDC1Q9NWM3 386 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-215ENST00000533946 CTSFQ9UBX1 484 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 POLG2Q9UHN1 485 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 FBXO5Q9UKT4 447 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 PSAT1Q9Y617 370 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 MAU2Q9Y6X3 613 aa9.24□□□□□ -0.93
SSBP3-215ENST00000533946 CTAGE9A4FU28 777 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 OR2W5A6NFC9 320 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 C21orf140B9A014 251 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 QSOX1O00391 747 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 ZSCAN9O15535 394 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 DNAJB6O75190 326 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PSIP1O75475 530 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 USP1O94782 785 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 SLC16A8O95907 504 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 AHSGP02765 367 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 MSL3P1P0C860 447 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 MLNP12872 115 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 OGNP20774 298 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 ALAS2P22557 587 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms