RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CDKN2DP55273 166 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 CDH12P55289 794 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 PPP2R2BQ00005 443 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 NFKB2Q00653 900 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 UBXN11Q5T124 520 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 C10orf62Q5T681 223 aaPredicted RBP11.97□□□□□ -0.49
BDNF-218ENST00000533246 Q6ZNX1 250 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 SPARTQ8N0X7 666 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 CCDC106Q9BWC9 280 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 HDHD2Q9H0R4 259 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 RPS6KB2Q9UBS0 482 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 IFT52Q9Y366 437 aa11.97□□□□□ -0.49
BDNF-218ENST00000533246 M0QX08 132 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 PCCBP05166 539 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 ABATP80404 500 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 TOMM20Q15388 145 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 MAMDC4Q6UXC1 1216 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 KCTD8Q6ZWB6 473 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 SNX20Q7Z614 316 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 SLCO6A1Q86UG4 719 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 CAMKK1Q8N5S9 505 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 DPP10Q8N608 796 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 OR5AK3PQ8NH89 298 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 OR14C36Q8NHC7 312 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 ARNTL2Q8WYA1 636 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 UBE2E3Q969T4 207 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 SPACA7Q96KW9 195 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 TMEM246Q9BRR3 403 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 RIOK2Q9BVS4 552 aaKnown RBP11.96□□□□□ -0.49
BDNF-218ENST00000533246 LRRC3Q9BY71 257 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 SERHL2Q9H4I8 314 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 INTS7Q9NVH2 962 aaKnown RBP11.96□□□□□ -0.49
BDNF-218ENST00000533246 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 TFECO14948 347 aaPredicted RBP11.96□□□□□ -0.49
BDNF-218ENST00000533246 GPR39O43194 453 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 PRAMEF11O60813 436 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 MERTKQ12866 999 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.96□□□□□ -0.49
BDNF-218ENST00000533246 UXS1Q8NBZ7 420 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 C20orf27Q9GZN8 174 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 RNF186Q9NXI6 227 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 CCDC59Q9P031 241 aaKnown RBP11.96□□□□□ -0.49
BDNF-218ENST00000533246 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 SLCO3A1Q9UIG8 710 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 SAMD4AQ9UPU9 718 aaKnown RBP11.96□□□□□ -0.49
BDNF-218ENST00000533246 ANGPT4Q9Y264 503 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 ADAMTSL3P82987 1691 aa11.96□□□□□ -0.49
BDNF-218ENST00000533246 C2orf78A6NCI8 922 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 CLDN25C9JDP6 229 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 ATP6V1G2-DDX39BF2Z307 99 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 PPP6CO00743 305 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 INPPL1O15357 1258 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 GM2AP17900 193 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 RPL10P27635 214 aaKnown RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 MLLT3P42568 568 aaPredicted RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 RPL35P42766 123 aaKnown RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 CDKN1CP49918 316 aaPredicted RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 RHDQ02161 417 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 PCBP2Q15366 365 aaKnown RBP eCLIP11.96□□□□□ -0.5
BDNF-218ENST00000533246 HKDC1Q2TB90 917 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 C2orf27AQ580R0 203 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 ZNF678Q5SXM1 525 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 ZNF57Q68EA5 555 aaPredicted RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 ANKRD26P1Q6NSI1 321 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 PSAPL1Q6NUJ1 521 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 MBOAT1Q6ZNC8 495 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 PTCHD4Q6ZW05 846 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 METTL3Q86U44 580 aaKnown RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 AMER2Q8N7J2 671 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 C19orf18Q8NEA5 215 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 OR2AP1Q8NGE2 309 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 CSGALNACT1Q8TDX6 532 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 UTP4Q969X6 686 aaKnown RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 TP53INP1Q96A56 240 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 ARMC5Q96C12 935 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 IMP4Q96G21 291 aaKnown RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 QRFPRQ96P65 431 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 DIABLOQ9NR28 239 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 SEC14L3Q9UDX4 400 aa11.96□□□□□ -0.5
BDNF-218ENST00000533246 RGS17Q9UGC6 210 aaPredicted RBP11.96□□□□□ -0.5
BDNF-218ENST00000533246 A0A1W2PPW3 197 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 ADAM23O75077 832 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 TPRP12270 2363 aaKnown RBP11.95□□□□□ -0.5
BDNF-218ENST00000533246 CDH1P12830 882 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 PTSQ03393 145 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SYT16Q17RD7 645 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 UAP1L1Q3KQV9 507 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 HID1Q8IV36 788 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 OR52B6Q8NGF0 335 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SLC22A17Q8WUG5 538 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 ACDQ96AP0 544 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 PLD4Q96BZ4 506 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 TSGA13Q96PP4 275 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 IER2Q9BTL4 223 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 FNDC11Q9BVV2 318 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 AP3M1Q9Y2T2 418 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 H0YJX3 145 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 S1PR4O95977 384 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms