RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ARNTP27540 789 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNF140P52738 457 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 UBE2IP63279 158 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 ACY1Q03154 408 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 THOC5Q13769 683 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 RASA2Q15283 850 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 TTMPQ5BVD1 217 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 AGBL2Q5U5Z8 902 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 NEPROQ6NW34 567 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 ADGRD1Q6QNK2 874 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNF517Q6ZMY9 492 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 MICALCLQ6ZW33 695 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 USP45Q70EL2 814 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 TECPR1Q7Z6L1 1165 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 TRIM74Q86UV6 250 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC26A11Q86WA9 606 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 PHYKPLQ8IUZ5 450 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CYP4X1Q8N118 509 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZADH2Q8N4Q0 377 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 SIDT2Q8NBJ9 832 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 OR6P1Q8NGX9 317 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CDKL2Q92772 493 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 PEX13Q92968 403 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 EID2BQ96D98 161 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 PGM2Q96G03 612 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CDKN2AIPNLQ96HQ2 116 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 MCCC1Q96RQ3 725 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 LYSMD1Q96S90 227 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 AGAP2Q99490 1192 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 ABCG8Q9H221 673 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 BPIFA1Q9NP55 256 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 MED4Q9NPJ6 270 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 NLE1Q9NVX2 485 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 IL17CQ9P0M4 197 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC17A6Q9P2U8 582 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CTNNAL1Q9UBT7 734 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 LGALS13Q9UHV8 139 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 KCNK6Q9Y257 313 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 IKBKGQ9Y6K9 419 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 NF1P21359 2839 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 C1orf232A0A0U1RR37 186 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 CCDC162PA2VCL2 907 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 NPIPB15A6NHN6 443 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 KIF1CO43896 1103 aaKnown RBP10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 VIPP01282 170 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 INHBAP08476 426 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 ACP5P13686 325 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 BPIP17213 487 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 LHCGRP22888 699 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 CAPZBP47756 277 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 PRAMEP78395 509 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 NAB1Q13506 487 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 RAPSNQ13702 412 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 FAM92BQ6ZTR7 304 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNF765Q7L2R6 523 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 MTERF4Q7Z6M4 381 aaKnown RBP10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 TSPAN33Q86UF1 283 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 FJX1Q86VR8 437 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 TRIM48Q8IWZ4 208 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 RIBC1Q8N443 379 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 COX14Q96I36 57 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 ATP6V1G3Q96LB4 118 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 PLEKHG4BQ96PX9 1271 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 NLNQ9BYT8 704 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 RAB33BQ9H082 229 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZFYVE1Q9HBF4 777 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 EURLQ9NYK6 297 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZFATQ9P243 1243 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 PSMC3IPQ9P2W1 217 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 EPHA6Q9UF33 1036 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 TBK1Q9UHD2 729 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 CD84Q9UIB8 345 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 TCFL5Q9UL49 500 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 NOVA2Q9UNW9 492 aaKnown RBP10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 NTNG1Q9Y2I2 539 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 PKP3Q9Y446 797 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 PRKAB1Q9Y478 270 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC30A1Q9Y6M5 507 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 CSMD2Q7Z408 3487 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 DIDO1Q9BTC0 2240 aaKnown RBP10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 CELSR1Q9NYQ6 3014 aa10.97□□□□□ -0.65
TRAPPC4-213ENST00000533149 OR51F1A6NGY5 319 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 SCRG1O75711 98 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 GOT2P00505 430 aaKnown RBP10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 STSP08842 583 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 FOLR1P15328 257 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 SSTR2P30874 369 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 HMGCLP35914 325 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 SERPINB9P50453 376 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 CLCNKAP51800 687 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 PTSQ03393 145 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 CTBP1Q13363 440 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 TMED2Q15363 201 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 VWA2Q5GFL6 755 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 TNFAIP8L3Q5GJ75 292 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 GRTP1Q5TC63 336 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 LGSNQ5TDP6 509 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 IRGCQ6NXR0 463 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 PACS1Q6VY07 963 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms