RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 BRIX1Q8TDN6 353 aaKnown RBP12.47□□□□□ -0.41
COPB1-209ENST00000533096 NR4A3Q92570 626 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 ZNF304Q9HCX3 659 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 CHST11Q9NPF2 352 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 NLE1Q9NVX2 485 aaPredicted RBP12.47□□□□□ -0.41
COPB1-209ENST00000533096 C3orf18Q9UK00 162 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 NXT1Q9UKK6 140 aaKnown RBP12.47□□□□□ -0.41
COPB1-209ENST00000533096 SLC39A10Q9ULF5 831 aa12.47□□□□□ -0.41
COPB1-209ENST00000533096 KLF2Q9Y5W3 355 aaPredicted RBP12.47□□□□□ -0.41
COPB1-209ENST00000533096 PRRC2CQ9Y520 2896 aaKnown RBP12.46□□□□□ -0.41
COPB1-209ENST00000533096 NSG1A0A0A6YYJ2 146 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 TRAV17A0A0B4J275 112 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 TRBV5-4A0A0C4DH59 114 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 SLC5A10A0PJK1 596 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 SYCE3A1L190 88 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 FFAR3O14843 346 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 GPR42O15529 346 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 PSTPIP1O43586 416 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 OR1I1O60431 355 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 HPP00738 406 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 GSTM1P09488 218 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 OR56A5P0C7T3 313 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 RBP3P10745 1247 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 ESRRAP11474 423 aaPredicted RBP12.46□□□□□ -0.41
COPB1-209ENST00000533096 MST1P26927 711 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 CARSP49589 748 aaKnown RBP12.46□□□□□ -0.41
COPB1-209ENST00000533096 TNFSF10P50591 281 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 GSTM4Q03013 218 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 EEF1A2Q05639 463 aaKnown RBP12.46□□□□□ -0.41
COPB1-209ENST00000533096 TCTE1Q5JU00 501 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 ZNF324BQ6AW86 544 aaPredicted RBP12.46□□□□□ -0.41
COPB1-209ENST00000533096 BBS12Q6ZW61 710 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 CDKL3Q8IVW4 592 aaPredicted RBP12.46□□□□□ -0.41
COPB1-209ENST00000533096 KATNAL2Q8IYT4 538 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 LINC01555Q8NAE3 123 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 KRT35Q92764 455 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 SLC22A18Q96BI1 424 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 SLC26A1Q9H2B4 701 aa12.46□□□□□ -0.41
COPB1-209ENST00000533096 INTS7Q9NVH2 962 aaKnown RBP12.46□□□□□ -0.41
COPB1-209ENST00000533096 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
COPB1-209ENST00000533096 PIKFYVEQ9Y2I7 2098 aa12.46□□□□□ -0.42
COPB1-209ENST00000533096 HIVEP3Q5T1R4 2406 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 LOC105369274A0A096LPK9 316 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 LOC102723532A0A0G2JNH3 316 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 A0A0J9YVX5 310 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 CCDC162PA2VCL2 907 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 VSTM2BA6NLU5 285 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 A8MUI8 341 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 APOC4-APOC2K7ER74 178 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 WISP2O76076 250 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 RASAL1O95294 804 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 ONECUT2O95948 504 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 APOC2P02655 101 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 TPM3P06753 285 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 CELA2AP08217 269 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 ZGLP1P0C6A0 271 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 PRR35P0CG20 571 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 CXCR2P25025 360 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 MSNP26038 577 aaKnown RBP12.45□□□□□ -0.42
COPB1-209ENST00000533096 MAGEA1P43355 309 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 GCGRP47871 477 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 RAB28P51157 221 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 TDGF1P3P51864 188 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 EMP2P54851 167 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 CASP6P55212 293 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 CCDC38Q502W7 563 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 FRMPD2BQ6IN97 320 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 NDUFAF7Q7L592 441 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 VRK3Q8IV63 474 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 OR4N4Q8N0Y3 316 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 ZNF808Q8N4W9 903 aaPredicted RBP12.45□□□□□ -0.42
COPB1-209ENST00000533096 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 PSMF1Q92530 271 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 DNAJC7Q99615 494 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 ZNF282Q9UDV7 671 aaPredicted RBP12.45□□□□□ -0.42
COPB1-209ENST00000533096 TFR2Q9UP52 801 aa12.45□□□□□ -0.42
COPB1-209ENST00000533096 MRPS2Q9Y399 296 aaKnown RBP12.45□□□□□ -0.42
COPB1-209ENST00000533096 SPTBP11277 2137 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 IQCF5A8MTL0 148 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 FAM227AF5H4B4 570 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 DIAPH2O60879 1101 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 CTSVO60911 334 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 USP1O94782 785 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 MED26O95402 600 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 WDPCPO95876 746 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 CRYABP02511 175 aaKnown RBP12.44□□□□□ -0.42
COPB1-209ENST00000533096 TPM1P09493 284 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 PKLRP30613 574 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 CCR7P32248 378 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 PTGER4P35408 488 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 ST13P50502 369 aaKnown RBP12.44□□□□□ -0.42
COPB1-209ENST00000533096 KRTAP10-9P60411 292 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 PMP22Q01453 160 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 RBPJQ06330 500 aa12.44□□□□□ -0.42
COPB1-209ENST00000533096 YOD1Q5VVQ6 348 aaPredicted RBP12.44□□□□□ -0.42
COPB1-209ENST00000533096 ATG9BQ674R7 924 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms