RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PTPN18Q99952 460 aa14.96□□□□□ -0.02
PCDHA3-202ENST00000532566 CSNK1G1Q9HCP0 422 aa14.96□□□□□ -0.02
PCDHA3-202ENST00000532566 ZC4H2Q9NQZ6 224 aa14.96□□□□□ -0.02
PCDHA3-202ENST00000532566 KIAA1551Q9HCM1 1747 aa14.96□□□□□ -0.02
PCDHA3-202ENST00000532566 TRBV23OR9-2A0A075B6M9 112 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 TGFB1P01137 390 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PRG2P13727 222 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 NR4A1P22736 598 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 GRB7Q14451 532 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 LCN9Q8WX39 176 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 YTHDF1Q9BYJ9 559 aaKnown RBP14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 C11orf49Q9H6J7 331 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 RNF186Q9NXI6 227 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 DGKBQ9Y6T7 804 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 CCNB2O95067 398 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 RFC2P35250 354 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 AFF1P51825 1210 aaKnown RBP14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 COX10Q12887 443 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PDGFRLQ15198 375 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 MZT2AQ6P582 158 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 RAB2BQ8WUD1 216 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 SLC38A4Q969I6 547 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 CLIP3Q96DZ5 547 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 ZNF347Q96SE7 839 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 SAP18O00422 153 aaKnown RBP14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 SLC31A1O15431 190 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PDPK1O15530 556 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 MFN2O95140 757 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 RGS8P57771 180 aaPredicted RBP14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PRAMEF14Q5SWL7 426 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PRAMEF13Q5VWM6 474 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 KDM1BQ8NB78 822 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 MAPK15Q8TD08 544 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 ZNF483Q8TF39 744 aaPredicted RBP14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 LRCH3Q96II8 777 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 ZNF641Q96N77 438 aaPredicted RBP14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 LMAN2LQ9H0V9 348 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PCDHGB3Q9Y5G1 929 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 GADD45GO95257 159 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 FYNP06241 537 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 HNF1BP35680 557 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PRR5P85299 388 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 SP140Q13342 867 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 TEAD2Q15562 447 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 ZNF730Q6ZMV8 503 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 ISCA2Q86U28 154 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 SCML4Q8N228 414 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 SLITRK2Q9H156 845 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 PGAP2Q9UHJ9 254 aa14.95□□□□□ -0.02
PCDHA3-202ENST00000532566 C2orf78A6NCI8 922 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 LRRC14BA6NHZ5 514 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 NDUFS2O75306 463 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 OR6A2O95222 327 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 SLC35G6P0C7Q6 338 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 HSD17B2P37059 387 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 CCNIQ14094 377 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 RAB41Q5JT25 222 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 KLHL35Q6PF15 583 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 FAM43BQ6ZT52 329 aaPredicted RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 SYVN1Q86TM6 617 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 MMAAQ8IVH4 418 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 CELF5Q8N6W0 485 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 ST13P5Q8NFI4 369 aaPredicted RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 SLC9A6Q92581 669 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 GTPBP3Q969Y2 492 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 SMG9Q9H0W8 520 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 OSER1Q9NX31 292 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 IRGMA1A4Y4 181 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 TMCC2O75069 709 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 ANXA8P13928 327 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 HMGCLP35914 325 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 RPL4P36578 427 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 CSNK2BP67870 215 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 ILF3Q12906 894 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 LMAN2Q12907 356 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 PPP1R8Q12972 351 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 SNAPC1Q16533 368 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 DUOXA1Q1HG43 343 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 CLLU1OSQ5K130 101 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 NANOGP8Q6NSW7 305 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 GPR153Q6NV75 609 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 NEK5Q6P3R8 708 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 MBOAT1Q6ZNC8 495 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 NEK10Q6ZWH5 1172 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 ZNF671Q8TAW3 534 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 CEP295NLQ96MC4 621 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 NANOGQ9H9S0 305 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 FBXL21Q9UKT6 434 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 FBXW2Q9UKT8 454 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 FZD4Q9ULV1 537 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 MPZL2O60487 215 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 POP7O75817 140 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 POU2F1P14859 743 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 GLDCP23378 1020 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 CDH15P55291 814 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 GALNT1Q10472 559 aaPredicted RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 DENND5AQ6IQ26 1287 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 TNFAIP8L2Q6P589 184 aaPredicted RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 PAQR9Q6ZVX9 377 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms