RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PKLRP30613 574 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 BDKRB1P46663 353 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 GPLD1P80108 840 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 NFKB2Q00653 900 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 ILKQ13418 452 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 BIRC2Q13490 618 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 SQSTM1Q13501 440 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 GPR18Q14330 331 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 OR4D1Q15615 310 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 OCLNQ16625 522 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 CYP2A13Q16696 494 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 PHKG1Q16816 387 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 ANKS6Q68DC2 871 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 SULT1C3Q6IMI6 304 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
COPB1-208ENST00000532088 KLHL35Q6PF15 583 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 CDHR3Q6ZTQ4 885 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 GLRX5Q86SX6 157 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 GPSM1Q86YR5 675 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 KLHDC8AQ8IYD2 350 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 SPATA6LQ8N4H0 392 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 TMEM151AQ8N4L1 468 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 OR52E1Q8NGJ3 308 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 ARL8AQ96BM9 186 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 CCDC126Q96EE4 140 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 CNDP2Q96KP4 475 aaKnown RBP12.13□□□□□ -0.47
COPB1-208ENST00000532088 PKP4Q99569 1192 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 HGH1Q9BTY7 390 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 RAB33BQ9H082 229 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 TIMMDC1Q9NPL8 285 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 ARL15Q9NXU5 204 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 TMEM216Q9P0N5 145 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 LRIT1Q9P2V4 623 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 XPR1Q9UBH6 696 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 FTSJ1Q9UET6 329 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 RNF215Q9Y6U7 377 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 ARID1BQ8NFD5 2236 aaPredicted RBP12.13□□□□□ -0.47
COPB1-208ENST00000532088 VPS13AQ96RL7 3174 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 TRBV23OR9-2A0A075B6M9 112 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 FOXO6A8MYZ6 492 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 TNFSF14O43557 240 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 SH3BP5O60239 455 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 PLIN3O60664 434 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 IPO13O94829 963 aaKnown RBP12.12□□□□□ -0.47
COPB1-208ENST00000532088 ZWINTO95229 277 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 FKBP9O95302 570 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 PROCP04070 461 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 CDK4P11802 303 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 MTHFD2P13995 350 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 TAC1P20366 129 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 SDHBP21912 280 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 CCND1P24385 295 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 GGT5P36269 586 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 GLRBP48167 497 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 MAGOHP61326 146 aaKnown RBP12.12□□□□□ -0.47
COPB1-208ENST00000532088 DAB2P98082 770 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 HSP90B2PQ58FF3 399 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 TTMPQ5BVD1 217 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 N4BP2L1Q5TBK1 243 aaPredicted RBP12.12□□□□□ -0.47
COPB1-208ENST00000532088 AMIGO1Q86WK6 493 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 SFTPA2Q8IWL1 248 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 OR2L8Q8NGY9 312 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 SETD7Q8WTS6 366 aaKnown RBP12.12□□□□□ -0.47
COPB1-208ENST00000532088 UBTD2Q8WUN7 234 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 LCN9Q8WX39 176 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 SCYL1Q96KG9 808 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 SLC38A3Q99624 504 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 DPYSL5Q9BPU6 564 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 CNOT10Q9H9A5 744 aaKnown RBP12.12□□□□□ -0.47
COPB1-208ENST00000532088 PTBP2Q9UKA9 531 aaKnown RBP12.12□□□□□ -0.47
COPB1-208ENST00000532088 EMCNQ9ULC0 261 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 ICKQ9UPZ9 632 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 TDRKHQ9Y2W6 561 aaKnown RBP12.12□□□□□ -0.47
COPB1-208ENST00000532088 DYRK1BQ9Y463 629 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 ENTPD2Q9Y5L3 495 aa12.12□□□□□ -0.47
COPB1-208ENST00000532088 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 STX16-NPEPL1H3BU86 382 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 STX16O14662 325 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 SMIM24O75264 130 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 SLC16A8O95907 504 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 TOP3BO95985 862 aaKnown RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 S100BP04271 92 aaPredicted RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 SBK3P0C264 359 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 CSRP1P21291 193 aaKnown RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 ATP5F1P24539 256 aaPredicted RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 IMPA1P29218 277 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 GMPRP36959 345 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 KCNC1P48547 511 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 PNLIPRP1P54315 467 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 ALDH18A1P54886 795 aaKnown RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 NAA20P61599 178 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 PRKG2Q13237 762 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 PLCL1Q15111 1095 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 ZYG11AQ6WRX3 759 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 SLC22A9Q8IVM8 553 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 CARFQ8N187 725 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 OR56A3Q8NH54 315 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 TCP10LQ8TDR4 215 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms