RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 PIM1P11309 404 aaPredicted RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 PCSK6P29122 969 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 AKT1P31749 480 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 SPAM1P38567 509 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 NSG1P42857 185 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 EIF1AXP47813 144 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 CARSP49589 748 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 KLK7P49862 253 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 POLR2FP61218 127 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 FANCCQ00597 558 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 HSF1Q00613 529 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 ALDH6A1Q02252 535 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 EEF1A2Q05639 463 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 LONRF2Q1L5Z9 754 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 ATP13A4Q4VNC1 1196 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 KRTCAP3Q53RY4 240 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 HSP90AA4PQ58FG1 418 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 ZNF766Q5HY98 468 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 FNBP1LQ5T0N5 605 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 NCBP2-AS2Q69YL0 99 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 ACAD10Q6JQN1 1059 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 SARM1Q6SZW1 724 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 PAMR1Q6UXH9 720 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 FAM151BQ6UXP7 276 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 NEK10Q6ZWH5 1172 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 DET1Q7L5Y6 550 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 DAAM2Q86T65 1068 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 AMIGO1Q86WK6 493 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 DOLPP1Q86YN1 238 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 SIAH3Q8IW03 269 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 CHERPQ8IWX8 916 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 GHDCQ8N2G8 530 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 MARVELD2Q8N4S9 558 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 SVOPQ8N4V2 548 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 METTL27Q8N6F8 245 aaPredicted RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 OR2L2Q8NH16 312 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 HM13Q8TCT9 377 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 NAT14Q8WUY8 206 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 MBD6Q96DN6 1003 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 RBM41Q96IZ5 413 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 SLC30A3Q99726 388 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 POLDIP3Q9BY77 421 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 GSX2Q9BZM3 304 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 XPO4Q9C0E2 1151 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 TFB2MQ9H5Q4 396 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 PCDH18Q9HCL0 1135 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 LRFN1Q9P244 771 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 NPIPA1Q9UND3 350 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 ZNF407Q9C0G0 2248 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 FAM237BA0A1B0GVD1 139 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 A0A1W2PQ72 361 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 KLHL33A6NCF5 533 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ASPDHA6ND91 283 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 FAM181BA6NEQ2 426 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 VSTM2BA6NLU5 285 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 OIP5O43482 229 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 CTAG2O75638 210 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 TOXO94900 526 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ITGAMP11215 1152 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 PCSK2P16519 638 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ALAS2P22557 587 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
CD44-232ENST00000531118 PCK1P35558 622 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 RAB28P51157 221 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 DGKQP52824 942 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ARSFP54793 590 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 KLC1Q07866 573 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ZBTB17Q13105 803 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 PPP2R5EQ16537 467 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 IFI16Q16666 785 aaKnown RBP7.84□□□□□ -1.15
CD44-232ENST00000531118 TPD52L1Q16890 204 aaPredicted RBP7.84□□□□□ -1.15
CD44-232ENST00000531118 BCL7AQ4VC05 210 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 TFDP3Q5H9I0 405 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 FGD2Q7Z6J4 655 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 SYT9Q86SS6 491 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 NT5DC3Q86UY8 548 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 PRSS58Q8IYP2 241 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 DNAJC22Q8N4W6 341 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 DTWD1Q8N5C7 304 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 TAB3Q8N5C8 712 aaPredicted RBP7.84□□□□□ -1.15
CD44-232ENST00000531118 FLVCR1-AS1Q8TAF5 88 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ASB5Q8WWX0 329 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 FRMD6Q96NE9 622 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 OR2A14Q96R47 310 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 GPATCH1Q9BRR8 931 aaKnown RBP7.84□□□□□ -1.15
CD44-232ENST00000531118 TRIM51Q9BSJ1 452 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 CBX8Q9HC52 389 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 IL26Q9NPH9 171 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ENAMQ9NRM1 1142 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 CUTCQ9NTM9 273 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 PARVAQ9NVD7 372 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 RIC8BQ9NVN3 520 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 SMOXQ9NWM0 555 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 EURLQ9NYK6 297 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 TAS2R14Q9NYV8 317 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 PLCL2Q9UPR0 1127 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ICKQ9UPZ9 632 aa7.84□□□□□ -1.15
CD44-232ENST00000531118 ARID1AO14497 2285 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 ZANQ9Y493 2812 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms