RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 TMEM207Q6UWW9 146 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 RPS27LQ71UM5 84 aaKnown RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 YTHDF3Q7Z739 585 aaKnown RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 TMEFF1Q8IYR6 380 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 OR4E2Q8NGC2 313 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 SLC5A11Q8WWX8 675 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 BIRC7Q96CA5 298 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 FRG2BQ96QU4 278 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 SH3GL3Q99963 347 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 ADGRE2Q9UHX3 823 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 PCTPQ9UKL6 214 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 NUMA1Q14980 2115 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 ALPK3Q96L96 1907 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 ATG2BQ96BY7 2078 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 A0A1W2PPC4 97 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 POM121BA6NF01 834 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 ARHGEF33A8MVX0 844 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 LATO43561 262 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 ATXN8OSP0DMR3 200 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 ALOX15P16050 662 aaPredicted RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 RPL3P39023 403 aaKnown RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 RAB28P51157 221 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 DAB2P98082 770 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 CTBSQ01459 385 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 SIGLEC14Q08ET2 396 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 ARHGAP19Q14CB8 494 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 MBOAT1Q6ZNC8 495 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 CLNKQ7Z7G1 428 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 OXR1Q8N573 874 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 KYQ8NBH2 561 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 ACTRT2Q8TDY3 377 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 RSRC1Q96IZ7 334 aaKnown RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 NSUN5Q96P11 429 aaKnown RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 GPR78Q96P69 363 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 PKP4Q99569 1192 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 TRIM15Q9C019 465 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 NMUR2Q9GZQ4 415 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 PRDM6Q9NQX0 595 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 SOHLH2Q9NX45 425 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 STOX2Q9P2F5 926 aaPredicted RBP7.2□□□□□ -1.26
BDNF-214ENST00000530786 TRPS1Q9UHF7 1281 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 SNX7Q9UNH6 387 aa7.2□□□□□ -1.26
BDNF-214ENST00000530786 SLC5A10A0PJK1 596 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 CCDC154A6NI56 674 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 RASSF9O75901 435 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 C1orf105O95561 183 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 RPS17P08708 135 aaKnown RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 CDH3P22223 829 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 SLBPQ14493 270 aaKnown RBP eCLIP7.19□□□□□ -1.26
BDNF-214ENST00000530786 SUSD1Q6UWL2 747 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 SNX32Q86XE0 403 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 PPFIBP2Q8ND30 876 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 RP9Q8TA86 221 aaKnown RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 PTCD3Q96EY7 689 aaKnown RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 LINC00615Q96LM1 132 aaPredicted RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 THTPAQ9BU02 230 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 C1orf109Q9NX04 203 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 GPRC5BQ9NZH0 403 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 FBXO9Q9UK97 447 aaPredicted RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 ADAMTS6Q9UKP5 1117 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 ZFR2Q9UPR6 939 aaKnown RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 KNL1Q8NG31 2342 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 GOLGA4Q13439 2230 aaKnown RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 KIAA1671Q9BY89 1806 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 KIR2DS5A0A0G2JLQ3 304 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 A0A0G2JNG1 304 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 EVPLLA8MZ36 301 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 KIR2DS3K7RE56 304 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 GAPDHSO14556 408 aaPredicted RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 BCAT2O15382 392 aaPredicted RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 OR1F1O43749 312 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 SNRPB2P08579 225 aaKnown RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 HRH2P25021 359 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 MAOBP27338 520 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 S100A3P33764 101 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 TRIM23P36406 574 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 HPCAL1P37235 193 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 RANBP1P43487 201 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 CLNS1AP54105 237 aaKnown RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 TAS2R38P59533 333 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 TBPL1P62380 186 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 B4GALNT1Q00973 533 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 NFYCQ13952 458 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 KIR2DS5Q14953 304 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 C1orf146Q5VVC0 180 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 CYP20A1Q6UW02 462 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 EPGNQ6UW88 154 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 SBSNQ6UWP8 590 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 LAYNQ6UX15 382 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 SZRD1Q7Z422 152 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 MFSD2AQ8NA29 543 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 TP53I13Q8NBR0 393 aaPredicted RBP7.19□□□□□ -1.26
BDNF-214ENST00000530786 TMEM145Q8NBT3 493 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 OR13H1Q8NG92 308 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 OR5AR1Q8NGP9 310 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 EBF4Q9BQW3 602 aa7.19□□□□□ -1.26
BDNF-214ENST00000530786 EFHD1Q9BUP0 239 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms