RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 TNIP1Q15025 636 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 ZNF239Q16600 458 aaKnown RBP2.5□□□□□ -2.01
NUP98-218ENST00000530516 ODF4Q2M2E3 257 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 SGSM1Q2NKQ1 1148 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 UGT3A2Q3SY77 523 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 GLIPR1L2Q4G1C9 344 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 CBWD6Q4V339 395 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 FASTKD1Q53R41 847 aaKnown RBP2.5□□□□□ -2.01
NUP98-218ENST00000530516 CBWD3Q5JTY5 395 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 FIP1L1Q6UN15 594 aaKnown RBP2.5□□□□□ -2.01
NUP98-218ENST00000530516 NUDT13Q86X67 352 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 HOGA1Q86XE5 327 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 CDK20Q8IZL9 346 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 PRSS33Q8NF86 280 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 OR10G8Q8NGN5 311 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 OR1L3Q8NH93 324 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 CFAP61Q8NHU2 1237 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 PIGBQ92521 554 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 SPACA9Q96E40 222 aaPredicted RBP2.5□□□□□ -2.01
NUP98-218ENST00000530516 RSRC1Q96IZ7 334 aaKnown RBP2.5□□□□□ -2.01
NUP98-218ENST00000530516 NSMCE3Q96MG7 304 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 URM1Q9BTM9 101 aaKnown RBP2.5□□□□□ -2.01
NUP98-218ENST00000530516 MXD3Q9BW11 206 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 GOLPH3LQ9H4A5 285 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 RPS10P5Q9NQ39 176 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.5□□□□□ -2.01
NUP98-218ENST00000530516 GKN1Q9NS71 199 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 MAN2C1Q9NTJ4 1040 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 PANK4Q9NVE7 773 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 PPP1R3CQ9UQK1 317 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 PADI2Q9Y2J8 665 aa2.5□□□□□ -2.01
NUP98-218ENST00000530516 A0A1W2PPQ1 181 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 C2orf81A6NN90 581 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 C15orf61A6NNL5 157 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 SOCS3O14543 225 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 MEIS2O14770 477 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 ADAM20O43506 726 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 AHCYL1O43865 530 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 WDHD1O75717 1129 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 BEST1O76090 585 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 GFPT2O94808 682 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 SEC24AO95486 1093 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 IGHV2-70P01814 119 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 DARSP14868 501 aaKnown RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 SAT1P21673 171 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 CDH3P22223 829 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 ACTN2P35609 894 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 MMP12P39900 470 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 HNF4AP41235 474 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 PAX9P55771 341 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 GSCP56915 257 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 CSNK2BP67870 215 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 NECTIN1Q15223 517 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 HLA-BQ31612 363 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 PDLIM3Q53GG5 364 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 RILPL1Q5EBL4 403 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 TCTEX1D4Q5JR98 221 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 NUP54Q7Z3B4 507 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 ARHGAP22Q7Z5H3 698 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 MMD2Q8IY49 270 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 TAGAPQ8N103 731 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 VANGL1Q8TAA9 524 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 NXNL1Q96CM4 212 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 OMA1Q96E52 524 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 AGAP3Q96P47 875 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 KRT12Q99456 494 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 MRPL1Q9BYD6 325 aaKnown RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 PITPNM3Q9BZ71 974 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 MAF1Q9H063 256 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 OPA3Q9H6K4 179 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 MYNNQ9NPC7 610 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 CCDC177Q9NQR7 707 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 FAM207AQ9NSI2 230 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 DPP3Q9NY33 737 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 FBXO2Q9UK22 296 aaPredicted RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 KLK13Q9UKR3 277 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 ABT1Q9ULW3 272 aaKnown RBP2.49□□□□□ -2.01
NUP98-218ENST00000530516 TNNQ9UQP3 1299 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 TMED3Q9Y3Q3 217 aa2.49□□□□□ -2.01
NUP98-218ENST00000530516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 SH3BP5O60239 455 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 MAGEC1O60732 1142 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 GLRA3O75311 464 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 CDK2AP2O75956 126 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 NXPH2O95156 264 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 VTNP04004 478 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 UGT1A4P22310 534 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 PTGER4P35408 488 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 RPL21P46778 160 aaKnown RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 NFATC2Q13469 925 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 E2F5Q15329 346 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 SNAPC1Q16533 368 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 C2CD6Q53TS8 623 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 SPATA1Q5VX52 437 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 UGT3A1Q6NUS8 523 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 MZT2BQ6NZ67 158 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 ZNF343Q6P1L6 599 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 TRIM65Q6PJ69 517 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 FAM198BQ6UWH4 519 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms