RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CAPN1P07384 714 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 ERGP11308 486 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 PAFAH1B1P43034 410 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 DHX9Q08211 1270 aaKnown RBP31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 SF1Q15637 639 aaKnown RBP31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 KLHL38Q2WGJ6 581 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 HSP90AA5PQ58FG0 334 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 SPANXN3Q5MJ09 141 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 ZNF549Q6P9A3 640 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 KLHL7Q8IXQ5 586 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 C2orf73Q8N5S3 287 aaPredicted RBP31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 PROKR1Q8TCW9 393 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 C17orf62Q9BQA9 187 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 EURLQ9NYK6 297 aa31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 TARM1B6A8C7 271 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 MYO1CO00159 1063 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 ENO3P13929 434 aaPredicted RBP31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 LCN10Q6JVE6 187 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 TAX1BP1Q86VP1 789 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 APLFQ8IW19 511 aaPredicted RBP31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 GIMAP7Q8NHV1 300 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 ZUFSPQ96AP4 578 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 DHRS4Q9BTZ2 278 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 SPRTNQ9H040 489 aaPredicted RBP31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 CAMSAP3Q9P1Y5 1249 aaPredicted RBP31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 DHRS7Q9Y394 339 aa31.78■■■□□ 2.68
SSSCA1-205ENST00000527920 ARHGEF33A8MVX0 844 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 CATP04040 527 aaKnown RBP31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 AGXTP21549 392 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 PMS2P54278 862 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 RPS18P62269 152 aaKnown RBP31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 ARHGAP19Q14CB8 494 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 MSS51Q4VC12 460 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 EEF1AKMT2Q5JPI9 291 aaKnown RBP31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 FIGLAQ6QHK4 219 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 CNTN4Q8IWV2 1026 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 FAM20CQ8IXL6 584 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 PDIK1LQ8N165 341 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 ENDOVQ8N8Q3 282 aaKnown RBP31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 FBXO15Q8NCQ5 510 aaPredicted RBP31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 C2CD4AQ8NCU7 369 aaPredicted RBP31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 OR9A1PQ8NGU1 263 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 LRRC39Q96DD0 335 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 SLC30A3Q99726 388 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 TCFL5Q9UL49 500 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 MAN2B2Q9Y2E5 1009 aa31.77■■■□□ 2.68
SSSCA1-205ENST00000527920 SNRNP200O75643 2136 aaKnown RBP31.76■■■□□ 2.68
SSSCA1-205ENST00000527920 C9J4A7 227 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 EIF3FO00303 357 aaPredicted RBP31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 CBSLP0DN79 551 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 CBSP35520 551 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 HSD17B2P37059 387 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 NAA25Q14CX7 972 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 NCF4Q15080 339 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 PTCHD3Q3KNS1 767 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 ZC3H12BQ5HYM0 836 aaKnown RBP31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 KIAA0408Q6ZU52 694 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 C9orf43Q8TAL5 461 aaPredicted RBP31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 INPP5DQ92835 1189 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 IARS2Q9NSE4 1012 aaKnown RBP31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 KLHL20Q9Y2M5 609 aa31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 HEMK1Q9Y5R4 338 aaPredicted RBP31.76■■■□□ 2.67
SSSCA1-205ENST00000527920 FANCGO15287 622 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 HAUS5O94927 633 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 MPC1LP0DKB6 136 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 GCGRP47871 477 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 MPP1Q00013 466 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 IL10RAQ13651 578 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 FCRL6Q6DN72 434 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 HIBCHQ6NVY1 386 aaPredicted RBP31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 GALNT7Q86SF2 657 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 MCATQ8IVS2 390 aaKnown RBP31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 OR2L3Q8NG85 312 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 OR2A1Q8NGT9 310 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 CD200R1Q8TD46 325 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 GBP5Q96PP8 586 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 AARSD1Q9BTE6 412 aaKnown RBP31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 TSR3Q9UJK0 312 aaKnown RBP31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 SNX7Q9UNH6 387 aa31.75■■■□□ 2.67
SSSCA1-205ENST00000527920 A0A1W2PPV9 198 aa31.74■■■□□ 2.67
SSSCA1-205ENST00000527920 BBS9Q3SYG4 887 aa31.74■■■□□ 2.67
SSSCA1-205ENST00000527920 ADAMTS17Q8TE56 1095 aa31.74■■■□□ 2.67
SSSCA1-205ENST00000527920 ASB11Q8WXH4 323 aa31.74■■■□□ 2.67
SSSCA1-205ENST00000527920 GPR21Q99679 349 aa31.74■■■□□ 2.67
SSSCA1-205ENST00000527920 NDC1Q9BTX1 674 aa31.74■■■□□ 2.67
SSSCA1-205ENST00000527920 PADI2Q9Y2J8 665 aa31.74■■■□□ 2.67
SSSCA1-205ENST00000527920 BSNQ9UPA5 3926 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 KRT87PA6NCN2 255 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 ZNF839A8K0R7 811 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 VPS26AO75436 327 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 BANF1O75531 89 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 RFPL1O75677 317 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 SEC31AO94979 1220 aaKnown RBP31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 F7P08709 466 aaPredicted RBP31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 CD63P08962 238 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 ERVK-10P10266 1014 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 GRIA3P42263 894 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 IGDCC3Q8IVU1 814 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 ZNF655Q8N720 491 aaPredicted RBP31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 SMPDL3AQ92484 453 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms