RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 HJURPQ8NCD3 748 aaPredicted RBP4.91□□□□□ -1.62
COPB1-204ENST00000526191 PGAM5Q96HS1 289 aa4.91□□□□□ -1.62
COPB1-204ENST00000526191 GUCD1Q96NT3 240 aa4.91□□□□□ -1.62
COPB1-204ENST00000526191 GHITMQ9H3K2 345 aa4.91□□□□□ -1.62
COPB1-204ENST00000526191 APOBEC3GQ9HC16 384 aaKnown RBP4.91□□□□□ -1.62
COPB1-204ENST00000526191 DNAJB4Q9UDY4 337 aa4.91□□□□□ -1.62
COPB1-204ENST00000526191 VPS28Q9UK41 221 aa4.91□□□□□ -1.62
COPB1-204ENST00000526191 CDH23Q9H251 3354 aa4.91□□□□□ -1.62
COPB1-204ENST00000526191 ARAP2Q8WZ64 1704 aa4.9□□□□□ -1.62
COPB1-204ENST00000526191 LAMA2P24043 3122 aaKnown RBP4.9□□□□□ -1.63
COPB1-204ENST00000526191 A6NCN8 305 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 PTGES3LE9PB15 166 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 NR5A2O00482 541 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 SMAD9O15198 467 aaKnown RBP4.9□□□□□ -1.63
COPB1-204ENST00000526191 RB1P06400 928 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 CLTBP09497 229 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 SELLP14151 372 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 GNAZP19086 355 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 ANXA7P20073 488 aaKnown RBP4.9□□□□□ -1.63
COPB1-204ENST00000526191 ACADLP28330 430 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 CAMPP49913 170 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 MMP15P51511 669 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 CLNS1AP54105 237 aaKnown RBP4.9□□□□□ -1.63
COPB1-204ENST00000526191 MC1RQ01726 317 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 LRMPQ12912 555 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 DUOXA1Q1HG43 343 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 CCDC152Q4G0S7 254 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 NDUFAF5Q5TEU4 345 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 SPATA1Q5VX52 437 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 TMEM198Q66K66 360 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 CLEC17AQ6ZS10 378 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 HACE1Q8IYU2 909 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.9□□□□□ -1.63
COPB1-204ENST00000526191 GSDMBQ8TAX9 411 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 TRPC4APQ8TEL6 797 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 FAM120BQ96EK7 910 aaKnown RBP4.9□□□□□ -1.63
COPB1-204ENST00000526191 OR2A14Q96R47 310 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 SDF4Q9BRK5 362 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 SEMA6AQ9H2E6 1030 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 PLK3Q9H4B4 646 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 TDRD3Q9H7E2 651 aaKnown RBP4.9□□□□□ -1.63
COPB1-204ENST00000526191 HAUS2Q9NVX0 235 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 OGFRQ9NZT2 677 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 FBXL17Q9UF56 701 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 GPR34Q9UPC5 381 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 A0A1B0GUL6 1792 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 FLT1P17948 1338 aa4.9□□□□□ -1.63
COPB1-204ENST00000526191 TEX13DA0A0J9YY54 714 aaPredicted RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 ERI2A8K979 691 aaKnown RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 CDRT15L2A8MXV6 281 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 ZBTB43O43298 467 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 HTATSF1O43719 755 aaKnown RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 ZNF500O60304 480 aaPredicted RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 GCNT3O95395 438 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 SRPRAP08240 638 aaKnown RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 IGHV4-38-2P0DP08 117 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 TMEM11P17152 192 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 PPP2R1AP30153 589 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 UBXN2AP68543 259 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 CREB5Q02930 508 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 IRF3Q14653 427 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 ZSCAN23Q3MJ62 389 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 DUSP28Q4G0W2 176 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 ASPRV1Q53RT3 343 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 PCGF5Q86SE9 256 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 MYPOPQ86VE0 399 aaPredicted RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 PTOV1Q86YD1 416 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 RPAP2Q8IXW5 612 aaPredicted RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 TEX11Q8IYF3 940 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 TDHQ8IZJ6 230 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 WDR20Q8TBZ3 569 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 NSUN4Q96CB9 384 aaKnown RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 ZBED3Q96IU2 234 aaPredicted RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 NCAPGQ9BPX3 1015 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 RAD21L1Q9H4I0 556 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 RCC2Q9P258 522 aaKnown RBP4.89□□□□□ -1.63
COPB1-204ENST00000526191 YIPF1Q9Y548 306 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 MED23Q9ULK4 1368 aa4.89□□□□□ -1.63
COPB1-204ENST00000526191 OR2M5A3KFT3 312 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 A6NL46 340 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 TMEM189-UBE2V1I3L0A0 370 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 J3QR06 171 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 PDHXO00330 501 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 PLK4O00444 970 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 SLC22A2O15244 555 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 CLIC2O15247 247 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 OGG1O15527 345 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 HS6ST1O60243 411 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 GFPT2O94808 682 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 TPPPO94811 219 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 ACTN1P12814 892 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 HOXA13P31271 388 aaPredicted RBP4.88□□□□□ -1.63
COPB1-204ENST00000526191 MSH2P43246 934 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 GPR143P51810 404 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 RIPK4P57078 832 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 IKQ13123 557 aaPredicted RBP4.88□□□□□ -1.63
COPB1-204ENST00000526191 AIMP2Q13155 320 aaKnown RBP4.88□□□□□ -1.63
COPB1-204ENST00000526191 PRKG2Q13237 762 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 UBE2V1Q13404 147 aa4.88□□□□□ -1.63
COPB1-204ENST00000526191 MVPQ14764 893 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms