RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 RDH14Q9HBH5 336 aa16.77■□□□□ 0.28
CCS-204ENST00000526066 PRDM8Q9NQV8 689 aa16.77■□□□□ 0.28
CCS-204ENST00000526066 ACTL7BQ9Y614 415 aa16.77■□□□□ 0.28
CCS-204ENST00000526066 KIR2DS5A0A0G2JLQ3 304 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 A0A0G2JNG1 304 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 CCDC189A1A4V9 331 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 KIR2DS3K7RE56 304 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 SNX2O60749 519 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 MATN4O95460 622 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 LTA4HP09960 611 aaKnown RBP16.76■□□□□ 0.27
CCS-204ENST00000526066 BRAFP15056 766 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 RPL10P27635 214 aaKnown RBP16.76■□□□□ 0.27
CCS-204ENST00000526066 PPM1FP49593 454 aaPredicted RBP16.76■□□□□ 0.27
CCS-204ENST00000526066 SRSF1Q07955 248 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■□□□□ 11
CCS-204ENST00000526066 KIR2DS5Q14953 304 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 FAM83EQ2M2I3 478 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 TSNAXIP1Q2TAA8 658 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 UNC5DQ6UXZ4 953 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 PIWIL4Q7Z3Z4 852 aaKnown RBP16.76■□□□□ 0.27
CCS-204ENST00000526066 LURAP1LQ8IV03 231 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 JPH3Q8WXH2 748 aaPredicted RBP16.76■□□□□ 0.27
CCS-204ENST00000526066 ALKBH8Q96BT7 664 aaKnown RBP16.76■□□□□ 0.27
CCS-204ENST00000526066 TAAR9Q96RI9 348 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 NMRAL1Q9HBL8 299 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 IGSF5Q9NSI5 407 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 PCMTD2Q9NV79 361 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 MKS1Q9NXB0 559 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 PSMD13Q9UNM6 376 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 WDR37Q9Y2I8 494 aa16.76■□□□□ 0.27
CCS-204ENST00000526066 FOXO6A8MYZ6 492 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 KLHL2O95198 593 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 EML2O95834 649 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 GSTA1P08263 222 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 KRT4P19013 534 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 IRF9Q00978 393 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 DLG1Q12959 904 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 SP140Q13342 867 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 CSHL1Q14406 222 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 CLCA4Q14CN2 919 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 C16orf72Q14CZ0 275 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 SEPT7Q16181 437 aaKnown RBP16.75■□□□□ 0.27
CCS-204ENST00000526066 IYDQ6PHW0 289 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 C17orf82Q86X59 251 aaPredicted RBP16.75■□□□□ 0.27
CCS-204ENST00000526066 SPNS2Q8IVW8 549 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 SRRM1Q8IYB3 904 aaKnown RBP16.75■□□□□ 0.27
CCS-204ENST00000526066 GOLGA6L1Q8N7Z2 621 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 AVL9Q8NBF6 648 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 SPDYE1Q8NFV5 336 aaPredicted RBP16.75■□□□□ 0.27
CCS-204ENST00000526066 KCTD4Q8WVF5 259 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 ASB11Q8WXH4 323 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 TFGQ92734 400 aaPredicted RBP16.75■□□□□ 0.27
CCS-204ENST00000526066 TLCD1Q96CP7 247 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 FOPNLQ96NB1 174 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 HEBP2Q9Y5Z4 205 aa16.75■□□□□ 0.27
CCS-204ENST00000526066 GFYI3L273 518 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 GOLGA8RI6L899 631 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 SLC16A5O15375 505 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 PSIP1O75475 530 aaKnown RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 RPN2P04844 631 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 C8GP07360 202 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 CD1DP15813 335 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 CSTF2P33240 577 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCS-204ENST00000526066 CCR10P46092 362 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 KPNA2P52292 529 aaKnown RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 OR1D5P58170 312 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 KCNAB2Q13303 367 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 TRA2AQ13595 282 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCS-204ENST00000526066 ACAP2Q15057 778 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 RPE65Q16518 533 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 EXOC3L1Q86VI1 746 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 NAGSQ8N159 534 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 PLD6Q8N2A8 252 aaKnown RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 SFRP1Q8N474 314 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 FBXO15Q8NCQ5 510 aaPredicted RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 AGBL5Q8NDL9 886 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 ZDHHC1Q8WTX9 485 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 SKA2Q8WVK7 121 aaPredicted RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 NXNL1Q96CM4 212 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 C12orf66Q96MD2 445 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 TSNARE1Q96NA8 513 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 GPR78Q96P69 363 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 SMC6Q96SB8 1091 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 INSM2Q96T92 566 aaPredicted RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 ASPSCR1Q9BZE9 553 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 TFB2MQ9H5Q4 396 aaKnown RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 MVB12BQ9H7P6 319 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 SSU72Q9NP77 194 aaKnown RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 SCHIP1Q9P0W5 487 aaPredicted RBP16.74■□□□□ 0.27
CCS-204ENST00000526066 DCDC2Q9UHG0 476 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 BOD1L1Q8NFC6 3051 aa16.74■□□□□ 0.27
CCS-204ENST00000526066 GLRA3O75311 464 aa16.73■□□□□ 0.27
CCS-204ENST00000526066 MTHFD1P11586 935 aaKnown RBP16.73■□□□□ 0.27
CCS-204ENST00000526066 CCL4P13236 92 aa16.73■□□□□ 0.27
CCS-204ENST00000526066 XRCC1P18887 633 aaPredicted RBP16.73■□□□□ 0.27
CCS-204ENST00000526066 NDUFS1P28331 727 aa16.73■□□□□ 0.27
CCS-204ENST00000526066 CRHR1P34998 444 aa16.73■□□□□ 0.27
CCS-204ENST00000526066 GMPRP36959 345 aa16.73■□□□□ 0.27
CCS-204ENST00000526066 CCT5P48643 541 aa16.73■□□□□ 0.27
CCS-204ENST00000526066 MAZP56270 477 aaKnown RBP16.73■□□□□ 0.27
CCS-204ENST00000526066 POLE2P56282 527 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms