RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 C21orf33P30042 268 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 CTNNB1P35222 781 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 IER3P46695 156 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 RPL21P46778 160 aaKnown RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 MMP15P51511 669 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 LUMP51884 338 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 EVCP57679 992 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 FOLH1Q04609 750 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ZNF155Q12901 538 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 TRA2AQ13595 282 aaKnown RBP eCLIP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 CA9Q16790 459 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 EFHC1Q5JVL4 640 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 PRAMEF8Q5VWM4 474 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 KLC3Q6P597 504 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 CCNI2Q6ZMN8 369 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ZNF704Q6ZNC4 412 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 IL17RELQ6ZVW7 336 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ANKRD33Q7Z3H0 272 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 PRSS42Q7Z5A4 293 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 TMPRSS12Q86WS5 348 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 FAM114A1Q8IWE2 563 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 CCDC83Q8IWF9 413 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 FBXL14Q8N1E6 418 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ARHGAP24Q8N264 748 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 L3MBTL4Q8NA19 623 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 FGFBP3Q8TAT2 258 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ST7LQ8TDW4 575 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 FIG4Q92562 907 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 SEMA4DQ92854 862 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 RUNDC3BQ96NL0 473 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 PANX3Q96QZ0 392 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ATG101Q9BSB4 218 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 TMEM204Q9BSN7 226 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 SLC2A11Q9BYW1 496 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 ABCG4Q9H172 646 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 VPS33BQ9H267 617 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 HIPK2Q9H2X6 1198 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 RNPEPL1Q9HAU8 725 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 TMEM161AQ9NX61 479 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 FZD10Q9ULW2 581 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 MYO6Q9UM54 1294 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 AGTPBP1Q9UPW5 1226 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 RPH3AQ9Y2J0 694 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 AMDHD2Q9Y303 409 aa4.28□□□□□ -1.72
CSDE1-211ENST00000525970 SPIN1Q9Y657 262 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-211ENST00000525970 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 TRAV24A0A0B4J272 114 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 RNF103-CHMP3A0A140T963 221 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 CLEC18AA5D8T8 446 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 KBTBD13C9JR72 458 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 H0YIG0 161 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 RNF103O00237 685 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 CTDSPLO15194 276 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 SMAD6O43541 496 aaKnown RBP4.27□□□□□ -1.73
CSDE1-211ENST00000525970 LDB3O75112 727 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 STAM2O75886 525 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 GLCEO94923 617 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 BMP10O95393 424 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 CLDN14O95500 239 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 C9P02748 559 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 ALPPP05187 535 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 LINC00271P0C7V0 271 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 ALPPL2P10696 532 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 MYOD1P15172 320 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 HOXD3P31249 432 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-211ENST00000525970 HPDP32754 393 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-211ENST00000525970 SERPINB6P35237 376 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 CDKN1AP38936 164 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 GPC3P51654 580 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 ARHGAP1Q07960 439 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 TRAF3Q13114 568 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 VEZF1Q14119 521 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 ZNF234Q14588 700 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 TDRD12Q587J7 1177 aaKnown RBP4.27□□□□□ -1.73
CSDE1-211ENST00000525970 TOR1AIP1Q5JTV8 583 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 ETFRF1Q6IPR1 90 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 FAM122CQ6P4D5 195 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 C1orf186Q6ZWK4 172 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 ARHGAP22Q7Z5H3 698 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 COMMD2Q86X83 199 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 PGBD5Q8N414 524 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 ARL6IP6Q8N6S5 226 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 PRR26Q8N8Z3 221 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 THAP8Q8NA92 274 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 CLEC18CQ8NCF0 446 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 NPEPL1Q8NDH3 523 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 RNF128Q8TEB7 428 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 SLC13A3Q8WWT9 602 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 TAF4BQ92750 862 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 PHF21AQ96BD5 680 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 EEF2KMTQ96G04 330 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 EPSTI1Q96J88 318 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 FSD1Q9BTV5 496 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 TM6SF1Q9BZW5 370 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 DCLK3Q9C098 648 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 S1PR5Q9H228 398 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 LRMDAQ9H2I8 198 aa4.27□□□□□ -1.73
CSDE1-211ENST00000525970 AKIRIN1Q9H9L7 192 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms