RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MAPK15Q8TD08 544 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 AGAP11Q8TF27 550 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 SH3KBP1Q96B97 665 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 ZNF382Q96SR6 550 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 RAB11FIP5Q9BXF6 653 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 SLC40A1Q9NP59 571 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 TNFRSF12AQ9NP84 129 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 CCDC177Q9NQR7 707 aaPredicted RBP20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 POT1Q9NUX5 634 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 ICKQ9UPZ9 632 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 STK38LQ9Y2H1 464 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 FIS1Q9Y3D6 152 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 LRP4O75096 1905 aa20.71■□□□□ 0.91
R3HCC1-208ENST00000522012 A0A1B0GTL3 188 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 CRCPO75575 148 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 OTCP00480 354 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 ERGP11308 486 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 PRDX3P30048 256 aaKnown RBP20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 PKLRP30613 574 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 RAB28P51157 221 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 UBE2IP63279 158 aaKnown RBP20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 WDR75Q8IWA0 830 aaKnown RBP20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 DCBLD1Q8N8Z6 715 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 ZNF473Q8WTR7 871 aaKnown RBP20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 LCN9Q8WX39 176 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 LOXL4Q96JB6 756 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 CDK15Q96Q40 435 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 SGPP1Q9BX95 441 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 CAPN10Q9HC96 672 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 HAO1Q9UJM8 370 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 DCTN4Q9UJW0 460 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 TRAF6Q9Y4K3 522 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 PIEZO1Q92508 2521 aa20.7■□□□□ 0.9
R3HCC1-208ENST00000522012 TMEM233B4DJY2 109 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 ESRRBO95718 433 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 EPORP19235 508 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 PKNOX1P55347 436 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 CDC16Q13042 620 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 PLCL1Q15111 1095 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 TERF2Q15554 542 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 ZNF423Q2M1K9 1284 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 SPATA21Q7Z572 469 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 MILR1Q7Z6M3 343 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 SLC25A45Q8N413 288 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 OR4E2Q8NGC2 313 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 OR2L8Q8NGY9 312 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 RFWD2Q8NHY2 731 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 SMPDL3AQ92484 453 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 OR4K3Q96R72 315 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 ARRDC1-AS1Q9H2J1 176 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 CSNK1G3Q9Y6M4 447 aa20.69■□□□□ 0.9
R3HCC1-208ENST00000522012 A0A1B0GTQ1 180 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 OR4F21O95013 312 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 EPN2O95208 641 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 CCND1P24385 295 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 SHMT2P34897 504 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 MPLP40238 635 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 MAZP56270 477 aaKnown RBP20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 ERVPABLB-1P60509 514 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 HHEXQ03014 270 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 GABPB1Q06547 395 aaPredicted RBP20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 GPR18Q14330 331 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 CCDC6Q16204 474 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 CLEC6AQ6EIG7 209 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 SLC23A3Q6PIS1 610 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 IL27RAQ6UWB1 636 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 AMIGO1Q86WK6 493 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 AFAP1L2Q8N4X5 818 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 LINC01555Q8NAE3 123 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 OR4F6Q8NGB9 312 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 ZFPM2Q8WW38 1151 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 MIPEPQ99797 713 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 SRMSQ9H3Y6 488 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 GAREM1Q9H706 876 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 ACTR8Q9H981 624 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 ZNF225Q9UK10 706 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 DYRK1BQ9Y463 629 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 KCNE2Q9Y6J6 123 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 USH1CQ9Y6N9 552 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 KMT2EQ8IZD2 1858 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 AZIN1O14977 448 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 SNX3O60493 162 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 FGF4P08620 206 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 NPPBP16860 134 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 TRAF3Q13114 568 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 BIRC2Q13490 618 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 GKAP1Q5VSY0 366 aaPredicted RBP20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 PRAMEF13Q5VWM6 474 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 FAM219BQ5XKK7 198 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 LETMD1Q6P1Q0 360 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 PIGWQ7Z7B1 504 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 MYLK4Q86YV6 388 aaPredicted RBP20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 CLYBLQ8N0X4 340 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 SETD7Q8WTS6 366 aaKnown RBP20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 KCNA7Q96RP8 456 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 PRRX2Q99811 253 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 NTMT1Q9BV86 223 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 ACAT2Q9BWD1 397 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 STN1Q9H668 368 aaKnown RBP20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 IL21RQ9HBE5 538 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms