RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 C11orf96Q7Z7L8 435 aa17.94■□□□□ 0.46
TRAPPC9-210ENST00000521667 CMTM7Q96FZ5 175 aa17.94■□□□□ 0.46
TRAPPC9-210ENST00000521667 OR4K3Q96R72 315 aa17.94■□□□□ 0.46
TRAPPC9-210ENST00000521667 SLAMF8Q9P0V8 285 aa17.94■□□□□ 0.46
TRAPPC9-210ENST00000521667 PRUNE2Q8WUY3 3088 aa17.94■□□□□ 0.46
TRAPPC9-210ENST00000521667 PRSS51A0A1B0GVH4 220 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 CLGNO14967 610 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 BCKDHAP12694 445 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 CD22P20273 847 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 PEX2P28328 305 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 DGKQP52824 942 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 RPS14P62263 151 aaKnown RBP17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 ZNF33BQ06732 778 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 PCDH1Q08174 1060 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 BNIP2Q12982 314 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 HTR4Q13639 388 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 NFE2L1Q14494 772 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 AGERQ15109 404 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 DOK6Q6PKX4 331 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 SUSD1Q6UWL2 747 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 PRR23BQ6ZRT6 265 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 KIAA2013Q8IYS2 634 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 OR2T3Q8NH03 318 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 NUDT8Q8WV74 236 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 ECSITQ9BQ95 431 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 KLHL4Q9C0H6 718 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 C15orf38-AP3S2A0A0A6YYH1 394 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 TCRBV3S1A0A5B6 114 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 RNASEH2AO75792 299 aaKnown RBP17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 GTF2A1P52655 376 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 DOC2AQ14183 400 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 RABL3Q5HYI8 236 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 CYP2R1Q6VVX0 501 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 ARPINQ7Z6K5 226 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 ZNF480Q8WV37 535 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 LRGUKQ96M69 825 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 LRCH1Q9Y2L9 728 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 TMED5Q9Y3A6 229 aa17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 PCYT1BQ9Y5K3 369 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-210ENST00000521667 ANHXE9PGG2 379 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 PRPS2P11908 318 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 ACADLP28330 430 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 MAPK1P28482 360 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 NTSR1P30989 418 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 HNF4AP41235 474 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 CSTF3Q12996 717 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 LRRC36Q1X8D7 754 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 GRHL2Q6ISB3 625 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 NANOGP8Q6NSW7 305 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 KIAA1211LQ6NV74 962 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 DLEU7Q6UYE1 221 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 FAM83HQ6ZRV2 1179 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 TMEM126BQ8IUX1 230 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 HID1Q8IV36 788 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 SLC13A3Q8WWT9 602 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 ZUFSPQ96AP4 578 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 DUS3LQ96G46 650 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 MSLNLQ96KJ4 702 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 LGR4Q9BXB1 951 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 TRIM8Q9BZR9 551 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 CLMPQ9H6B4 373 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 COPS7BQ9H9Q2 264 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 NANOGQ9H9S0 305 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 GPRC5BQ9NZH0 403 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 LMCD1Q9NZU5 365 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 PRKAB1Q9Y478 270 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 TRIOBPQ9H2D6 2365 aa17.92■□□□□ 0.46
TRAPPC9-210ENST00000521667 IL6P05231 212 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 EEFSECP57772 596 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 RPA4Q13156 261 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 OGFRL1Q5TC84 451 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 SDE2Q6IQ49 451 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 CAPN13Q6MZZ7 669 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 LRRTM4Q86VH4 590 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 AMZ2Q86W34 360 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 SYTL1Q8IYJ3 562 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 FAM9CQ8IZT9 166 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 OR9A1PQ8NGU1 263 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 WDR20Q8TBZ3 569 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 GABRG3Q99928 467 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 TRIM15Q9C019 465 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 OR52A5Q9H2C5 316 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 ALG2Q9H553 416 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 RIMS3Q9UJD0 308 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 DLGAP4Q9Y2H0 992 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 KCNE2Q9Y6J6 123 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 H0YIV9 168 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 PEX1O43933 1283 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 ACPPP15309 386 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 PCSK2P16519 638 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 ATP6V1B2P21281 511 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 GSK3BP49841 420 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 TBPL1P62380 186 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 LIPEQ05469 1076 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 PWP1Q13610 501 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 STARD3Q14849 445 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 LRIT3Q3SXY7 679 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 FAM174BQ3ZCQ3 159 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 TMEM196Q5HYL7 178 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 UNC5DQ6UXZ4 953 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms