RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 TSPY1Q01534 308 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 DPYSQ14117 519 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 KEAP1Q14145 624 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 ZRSR1Q15695 479 aaKnown RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 LETM2Q2VYF4 491 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 LRRC23Q53EV4 343 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 ZNF628Q5EBL2 1059 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 THOC7Q6I9Y2 204 aaKnown RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 RBM23Q86U06 439 aaKnown RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 HOOK3Q86VS8 718 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 ZNF606Q8WXB4 792 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 FAM84BQ96KN1 310 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 PRMT6Q96LA8 375 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 TSGA13Q96PP4 275 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 DUX5Q96PT3 197 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 OR6C1Q96RD1 312 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 MEIS3Q99687 375 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 C6orf106Q9H6K1 298 aaPredicted RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 C5AR2Q9P296 337 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 POU2F3Q9UKI9 436 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 RALYQ9UKM9 306 aaKnown RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 DLGAP4Q9Y2H0 992 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 DAPK1P53355 1430 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 NUP160Q12769 1436 aa6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 EIF2AK4Q9P2K8 1649 aaKnown RBP6.32□□□□□ -1.4
NUDCD1-204ENST00000521439 CROCC2H7BZ55 1655 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 HEPACAM2A8MVW5 462 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 NDUFAB1O14561 156 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 DVL1O14640 695 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 TSC22D2O75157 780 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 ATP6V1G1O75348 118 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 BMP10O95393 424 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 GGPS1O95749 300 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 RHOXF2BP0C7M4 288 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 HSPA8P11142 646 aaKnown RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 CDH1P12830 882 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 GM2AP17900 193 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 DNASE1P24855 282 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 ARCN1P48444 511 aaKnown RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 EVCP57679 992 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 CDK3Q00526 305 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 NR1D2Q14995 579 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 C1orf141Q5JVX7 400 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 TEX35Q5T0J7 233 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 GCNT6Q5T4J0 391 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 LCE1AQ5T7P2 110 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 IRAK1BP1Q5VVH5 260 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 C9orf57Q5W0N0 161 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 FIGLAQ6QHK4 219 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 KDELC1Q6UW63 502 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 UNQ6126/PRO20091Q6UXV3 157 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 PPP1R21Q6ZMI0 780 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 TMEM173Q86WV6 379 aaPredicted RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 ZBTB8BQ8NAP8 495 aaPredicted RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 PAPD5Q8NDF8 572 aaKnown RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 OR52K2Q8NGK3 314 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 ZNF653Q96CK0 615 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 RMDN1Q96DB5 314 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 MS4A10Q96PG2 267 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 CTAGE1Q96RT6 745 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 RHOXF2Q9BQY4 288 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 C16orf70Q9BSU1 422 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 TRIM4Q9C037 500 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 GPR88Q9GZN0 384 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 DDX31Q9H8H2 851 aaKnown RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 VPS37BQ9H9H4 285 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 PARVGQ9HBI0 331 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 HHATLQ9HCP6 504 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 ZCCHC17Q9NP64 241 aaKnown RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 KLHL1Q9NR64 748 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 ARGLU1Q9NWB6 273 aaPredicted RBP6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 IL17BQ9UHF5 180 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 OSGIN1Q9UJX0 560 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 CCL27Q9Y4X3 112 aa6.31□□□□□ -1.4
NUDCD1-204ENST00000521439 ENO4A6NNW6 628 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 CYTH3O43739 400 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 SNX4O95219 450 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 TRUB2O95900 331 aaKnown RBP6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 ATP6V1B1P15313 513 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 PFKFB1P16118 471 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 GABRA5P31644 462 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 IL15P40933 162 aaPredicted RBP6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 RAD23AP54725 363 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 WDR43Q15061 677 aaKnown RBP eCLIP6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 C20orf194Q5TEA3 1177 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 METTL11BQ5VVY1 283 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 PRSS57Q6UWY2 283 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 NANOGNBQ7Z5D8 188 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 ARHGAP22Q7Z5H3 698 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 MFN1Q8IWA4 741 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 MUC20Q8N307 709 aaPredicted RBP6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 RDM1Q8NG50 284 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 EXD1Q8NHP7 514 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 LZICQ8WZA0 190 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 SMPDL3BQ92485 455 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 SLC35B4Q969S0 331 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 ARSGQ96EG1 525 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 IGSF21Q96ID5 467 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 C16orf45Q96MC5 204 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms