RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ENAMQ9NRM1 1142 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 INTS7Q9NVH2 962 aaKnown RBP16.4■□□□□ 0.22
SQLE-205ENST00000521232 TLK1Q9UKI8 766 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 SNX7Q9UNH6 387 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 RUVBL2Q9Y230 463 aaKnown RBP16.4■□□□□ 0.22
SQLE-205ENST00000521232 KLHL20Q9Y2M5 609 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 MAD1L1Q9Y6D9 718 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 FLNBO75369 2602 aaKnown RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 E5RI56 91 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 DNALI1O14645 258 aaPredicted RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 ZSCAN9O15535 394 aaPredicted RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 PTGIRP43119 386 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 GCGRP47871 477 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 PTK6Q13882 451 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 NCF4Q15080 339 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 CYP2A13Q16696 494 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 KLHL38Q2WGJ6 581 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 LACTB2Q53H82 288 aaPredicted RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 ACSBG2Q5FVE4 666 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 PAPD7Q5XG87 772 aaKnown RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 ZNF549Q6P9A3 640 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 NEK10Q6ZWH5 1172 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 PCGF5Q86SE9 256 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 TAX1BP1Q86VP1 789 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 ZNF655Q8N720 491 aaPredicted RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 CALML6Q8TD86 181 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 DHRS4Q9BTZ2 278 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 FBXO6Q9NRD1 293 aaPredicted RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 C20orf96Q9NUD7 363 aaPredicted RBP16.39■□□□□ 0.21
SQLE-205ENST00000521232 SPATA7Q9P0W8 599 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 ANAPC2Q9UJX6 822 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 SRPK3Q9UPE1 567 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 MED16Q9Y2X0 877 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 KLK4Q9Y5K2 254 aa16.39■□□□□ 0.21
SQLE-205ENST00000521232 UBR5O95071 2799 aaPredicted RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 A0A1W2PPV9 198 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 C9J4A7 227 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 PSIP1O75475 530 aaKnown RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 KLF7O75840 302 aaPredicted RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 WISP1O95388 367 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 IVDP26440 423 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 GRIA3P42263 894 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 SLC1A2P43004 574 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 DCDP81605 110 aaKnown RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 ZC3H12BQ5HYM0 836 aaKnown RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 CREG2Q8IUH2 290 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 OR2A1Q8NGT9 310 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 OR9A1PQ8NGU1 263 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 ANP32BQ92688 251 aaKnown RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 KCNJ9Q92806 393 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 SLC30A3Q99726 388 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 NDC1Q9BTX1 674 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 TRIM55Q9BYV6 548 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 DHCR7Q9UBM7 475 aaKnown RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 ASIC3Q9UHC3 531 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 FBXO5Q9UKT4 447 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 TP53TG5Q9Y2B4 290 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 COMMD10Q9Y6G5 202 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 NBASA2RRP1 2371 aa16.38■□□□□ 0.21
SQLE-205ENST00000521232 SPENQ96T58 3664 aaKnown RBP16.38■□□□□ 0.21
SQLE-205ENST00000521232 SETXQ7Z333 2677 aaKnown RBP16.37■□□□□ 0.21
SQLE-205ENST00000521232 KRT87PA6NCN2 255 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 ARHGEF33A8MVX0 844 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 K7EM74 188 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 MYO1CO00159 1063 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 HAUS5O94927 633 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 F7P08709 466 aaPredicted RBP16.37■□□□□ 0.21
SQLE-205ENST00000521232 CD63P08962 238 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 ERGP11308 486 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 PGAM1P18669 254 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 GNG11P61952 73 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 TTLL9Q3SXZ7 439 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 HSP90AA5PQ58FG0 334 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.37■□□□□ 0.21
SQLE-205ENST00000521232 C1orf189Q5VU69 101 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 FAM69BQ5VUD6 431 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 MLIPQ5VWP3 458 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
SQLE-205ENST00000521232 OR2L3Q8NG85 312 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 ZNF285Q96NJ3 590 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 EBNA1BP2Q99848 306 aaKnown RBP16.37■□□□□ 0.21
SQLE-205ENST00000521232 ING2Q9H160 280 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 CCDC68Q9H2F9 335 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 TXLNGQ9NUQ3 528 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 PADI2Q9Y2J8 665 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 DHRS7Q9Y394 339 aa16.37■□□□□ 0.21
SQLE-205ENST00000521232 HEATR5BQ9P2D3 2071 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 ASH1LQ9NR48 2969 aaKnown RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 ARGFXA6NJG6 315 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 PYCARD-AS1I3L0S3 204 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 SRPX2O60687 465 aaPredicted RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 DNAJB5O75953 348 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 TTC4O95801 387 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 ONECUT2O95948 504 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 MPC1LP0DKB6 136 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 PSMB5P28074 263 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 CASRP41180 1078 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 CSRP3P50461 194 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 ARSFP54793 590 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 DHX9Q08211 1270 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms