RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 RELAQ04206 551 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 TIMM50Q3ZCQ8 353 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CCDC80Q76M96 950 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 NANOGNBQ7Z5D8 188 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 P2RY8Q86VZ1 359 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 UBASH3BQ8TF42 649 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MRPL48Q96GC5 212 aaKnown RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZBED3Q96IU2 234 aaPredicted RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 NUSAP1Q9BXS6 441 aaKnown RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 TOR3AQ9H497 397 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 TFB2MQ9H5Q4 396 aaKnown RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CMTM6Q9NX76 183 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 DNAJC15Q9Y5T4 150 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF780BQ9Y6R6 833 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 AXIN1O15169 862 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 OGNP20774 298 aaKnown RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 IGFBP5P24593 272 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 GABRB3P28472 473 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 CTSKP43235 329 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 ATP12AP54707 1039 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 TPTEP56180 551 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 PIGFQ07326 219 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 RGS1Q08116 209 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 LAPTM5Q13571 262 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZDHHC20Q5W0Z9 365 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 CACTIN-AS1Q8N1I8 211 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 AMER2Q8N7J2 671 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 ANKRD49Q8WVL7 239 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 KCNN1Q92952 543 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF607Q96SK3 696 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 PAAF1Q9BRP4 392 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 TDRD1Q9BXT4 1180 aaKnown RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 EHD3Q9NZN3 535 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 PDP1Q9P0J1 537 aaPredicted RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 MTRRQ9UBK8 725 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 DNAJB9Q9UBS3 223 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SEC14L3Q9UDX4 400 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SAMD4AQ9UPU9 718 aaKnown RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF701M0R085 212 aaPredicted RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 APODP05090 189 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 C7P10643 843 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 HSD17B1P14061 328 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 IDSP22304 550 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 LEPRP48357 1165 aaKnown RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC11A1P49279 550 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 KLHL12Q53G59 568 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 AKAP14Q86UN6 197 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF671Q8TAW3 534 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 MRGPRX2Q96LB1 330 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 TSGA13Q96PP4 275 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 TUBA1CQ9BQE3 449 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 NAA50Q9GZZ1 169 aaKnown RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 INTS7Q9NVH2 962 aaKnown RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 GABRQQ9UN88 632 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 URADA6NGE7 173 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 MEIS3P2A8K0S8 358 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SNPHO15079 494 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 ECI2O75521 394 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 FYNP06241 537 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 CCNYL3P0C7X3 344 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 PLA2G16P53816 162 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 CDKN2DP55273 166 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SH3BP2P78314 561 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SCAPQ12770 1279 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 TUBA3CQ13748 450 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 TOMM20Q15388 145 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SULT1C3Q6IMI6 304 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 HMBOX1Q6NT76 420 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 TCAIMQ8N3R3 496 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR52L1Q8NGH7 329 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 RAD51AP1Q96B01 352 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 FEM1AQ9BSK4 669 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SPRTNQ9H040 489 aaPredicted RBP10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 CXCL16Q9H2A7 254 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 GSTO2Q9H4Y5 243 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 SMURF2Q9HAU4 748 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 AGPAT4Q9NRZ5 378 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAT2BQ9NZL9 334 aa10.6□□□□□ -0.71
PCDHGA1-202ENST00000517417 A0A0G2JN53 185 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 CHURC1-FNTBB4DL54 471 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 POU2F1P14859 743 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 PPIBP23284 216 aaKnown RBP10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 DGKQP52824 942 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 UGT2B15P54855 530 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SEC13P55735 322 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 NANOGP8Q6NSW7 305 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 C14orf80Q86SX3 495 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SVOPLQ8N434 492 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 MFSD2AQ8NA29 543 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 TRUB1Q8WWH5 349 aaKnown RBP10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 KAT2AQ92830 837 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ACDQ96AP0 544 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR2AG1Q9H205 316 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 NANOGQ9H9S0 305 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 GULP1Q9UBP9 304 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 FAM47E-STBD1D6RA91 191 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms