RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 ABI1Q8IZP0 508 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 NXPE1Q8N323 547 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 TCAIMQ8N3R3 496 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 L3MBTL4Q8NA19 623 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 FBXO22Q8NEZ5 403 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 FRS2Q8WU20 508 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 BCL7CQ8WUZ0 217 aaPredicted RBP6.5□□□□□ -1.37
CDH12-203ENST00000517378 S100ZQ8WXG8 99 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 WBP2Q969T9 261 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 NCLNQ969V3 563 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 CMTM7Q96FZ5 175 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 CCDC138Q96M89 665 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 ALPK1Q96QP1 1244 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 SIGLEC11Q96RL6 698 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 PITX2Q99697 317 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 TBCDQ9BTW9 1192 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 APOL5Q9BWW9 433 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 ARHGAP39Q9C0H5 1083 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 SLC32A1Q9H598 525 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 ASB8Q9H765 288 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 TM9SF3Q9HD45 589 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 IL1RAPQ9NPH3 570 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 KCTD5Q9NXV2 234 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 PPT2Q9UMR5 302 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 DLGAP4Q9Y2H0 992 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 FNDC3AQ9Y2H6 1198 aaKnown RBP6.5□□□□□ -1.37
CDH12-203ENST00000517378 FCF1Q9Y324 198 aaKnown RBP6.5□□□□□ -1.37
CDH12-203ENST00000517378 PCDHGA10Q9Y5H3 936 aa6.5□□□□□ -1.37
CDH12-203ENST00000517378 IGLV3-16A0A075B6K0 115 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 GLYATL1P3A0A0U1RQE8 302 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 C1orf232A0A0U1RR37 186 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CXorf51AA0A1B0GTR3 108 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TMEM221A6NGB7 291 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 KPNA4O00629 521 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 ADAM12O43184 909 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 E2F6O75461 281 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 JRKO75564 520 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ANGPTL1O95841 491 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PDYNP01213 254 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 GALTP07902 379 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ANXA5P08758 320 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CTPS1P17812 591 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 SDC1P18827 310 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 MAPK1P28482 360 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 S100A3P33764 101 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 SPAM1P38567 509 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PSMD7P51665 324 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 RPS3AP61247 264 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 ZNF33BQ06732 778 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 VAC14Q08AM6 782 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ATXN7L2Q5T6C5 722 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 PRSS55Q6UWB4 352 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 TPGS1Q6ZTW0 290 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TAS1R1Q7RTX1 841 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ZNF551Q7Z340 670 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 CYP4Z1Q86W10 505 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TMEM173Q86WV6 379 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 ZDHHC21Q8IVQ6 265 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 HJURPQ8NCD3 748 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 ULK4Q96C45 1275 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 MAGEB10Q96LZ2 347 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 ZNF300Q96RE9 604 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 INPP5KQ9BT40 448 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 BTBD2Q9BX70 525 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 DGCR6LQ9BY27 220 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 MRPL9Q9BYD2 267 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 RNF38Q9H0F5 515 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PARVBQ9HBI1 364 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CCNB1IP1Q9NPC3 277 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 GKN1Q9NS71 199 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TRPM5Q9NZQ8 1165 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 WARS2Q9UGM6 360 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 NDRG4Q9ULP0 352 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 SNX6Q9UNH7 406 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CPQQ9Y646 472 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 AP1M2Q9Y6Q5 423 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PIKFYVEQ9Y2I7 2098 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 H0Y626 953 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 AXIN1O15169 862 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TSPAN3O60637 253 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PRMT3O60678 531 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TBL1XO60907 577 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 XYLBO75191 536 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TRIM16O95361 564 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PRKAR2AP13861 404 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 FPR1P21462 350 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CDH3P22223 829 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PRKACGP22612 351 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 GRK3P35626 688 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CDKN2CP42773 168 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 SLC6A12P48065 614 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TRPC1P48995 793 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CLK3P49761 638 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 OCA2Q04671 838 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PRKCZQ05513 592 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PIGFQ07326 219 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ATP1A4Q13733 1029 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CARD16Q5EG05 197 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 OR2T5Q6IEZ7 315 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 RGMBQ6NW40 437 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms