RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ZNF318Q5VUA4 2279 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 A0A087X0M5 115 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 A0A1B0GX30 115 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 A0A1W2PPR1 153 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 LNP1A1A4G5 178 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ANKUB1A6NFN9 424 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 A8MXK9 166 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PTGES3LE9PB15 166 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 OR2T7P0C7T2 308 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 LBX1P52954 281 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CXCL9Q07325 125 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 LY6DQ14210 128 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 EFTUD2Q15029 972 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 HERC3Q15034 1050 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 C15orf32Q32M92 178 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CES4AQ5XG92 561 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 C11orf63Q6NUN7 778 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TMEM173Q86WV6 379 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TTC39CQ8N584 583 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 AQP11Q8NBQ7 271 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 OR11H4Q8NGC9 324 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PSMB7Q99436 277 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MAK16Q9BXY0 300 aaKnown RBP2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 OSGEPL1Q9H4B0 414 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TRPV4Q9HBA0 871 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 DPP3Q9NY33 737 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PSD3Q9NYI0 1048 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PLAGL1Q9UM63 463 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TRIM17Q9Y577 477 aa2.3□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ABCA7Q8IZY2 2146 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PCDH11YQ9BZA8 1340 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ZNF541Q9H0D2 1346 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 A0A1W2PR80 420 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PI4KAP2A4QPH2 592 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 H0YAE9 185 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 J3KRW8 73 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 AP3D1O14617 1153 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MEIS2O14770 477 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CREG1O75629 220 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 POP4O95707 220 aaKnown RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TRUB2O95900 331 aaKnown RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 DARSP14868 501 aaKnown RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 JAK1P23458 1154 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ACSL1P33121 698 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MPP1Q00013 466 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ZFP36L1Q07352 338 aaKnown RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 LMOD3Q0VAK6 560 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TAF10Q12962 218 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 HSP90AB4PQ58FF6 505 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 XKR3Q5GH77 459 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SEL1L3Q68CR1 1132 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 FAAH2Q6GMR7 532 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 FRRS1Q6ZNA5 592 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ADGRA1Q86SQ6 560 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SLC47A2Q86VL8 602 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MARCH9Q86YJ5 346 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CEP57L1Q8IYX8 460 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ABHD12Q8N2K0 398 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 NPRL2Q8WTW4 380 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 GATAD1Q8WUU5 269 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 DHX58Q96C10 678 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 THOC1Q96FV9 657 aaKnown RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PDLIM5Q96HC4 596 aaKnown RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SPAG5Q96R06 1193 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 LGMNQ99538 433 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SHARPINQ9H0F6 387 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MMP27Q9H306 513 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TBC1D17Q9HA65 648 aa2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SEC63Q9UGP8 760 aaKnown RBP2.29□□□□□ -2.04
RNU6-1088P-201ENST00000516850 DDHD2O94830 711 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MBD4O95243 580 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SLC15A1P46059 708 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ZFP36L2P47974 494 aaKnown RBP2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 PNLIPRP2P54317 469 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 XGP55808 180 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CSNK2BP67870 215 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MYL7Q01449 175 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 GCNT1Q02742 428 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 KLC1Q07866 573 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 FCHO2Q0JRZ9 810 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ZNF74Q16587 644 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CDHR3Q6ZTQ4 885 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ZER1Q7Z7L7 766 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 AACSQ86V21 672 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 OR5T2Q8NGG2 359 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CHPT1Q8WUD6 406 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 APOBEC4Q8WW27 367 aaKnown RBP2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SSMEM1Q8WWF3 244 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 HDAC2Q92769 488 aaKnown RBP2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SFXN2Q96NB2 322 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CDRT15Q96T59 188 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 KIFC3Q9BVG8 833 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 THAP2Q9H0W7 228 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SYNCQ9H7C4 482 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 HEXA-AS1Q9H8Q6 139 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 WIPI2Q9Y4P8 454 aa2.28□□□□□ -2.04
RNU6-1088P-201ENST00000516850 LOC100509620A0A075B734 347 aa2.27□□□□□ -2.05
RNU6-1088P-201ENST00000516850 PGPEP1LA6NFU8 196 aa2.27□□□□□ -2.05
RNU6-1088P-201ENST00000516850 F5H0A9 414 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms