RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TPRG1Q6ZUI0 275 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 HIST3H2AQ7L7L0 130 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 CAMKMTQ7Z624 323 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 IQCHQ86VS3 1027 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 MAP7D3Q8IWC1 876 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 HSCBQ8IWL3 235 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 KLHDC8BQ8IXV7 354 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 MAML2Q8IZL2 1156 aaPredicted RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 ZNF619Q8N2I2 560 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 TRIML1Q8N9V2 468 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 CAMKVQ8NCB2 501 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 DBF4BQ8NFT6 615 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 OR10S1Q8NGN2 331 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 OR52I2Q8NH67 350 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 HMGCLL1Q8TB92 370 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 HM13Q8TCT9 377 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 PHF21AQ96BD5 680 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 LINGO1Q96FE5 620 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 CABS1Q96KC9 395 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 CEP295NLQ96MC4 621 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 DUX3Q96PT4 197 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 GAD1Q99259 594 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 MGME1Q9BQP7 344 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 TUBB2BQ9BVA1 445 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 NUP85Q9BW27 656 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 ACAT2Q9BWD1 397 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 EGLN1Q9GZT9 426 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 MMP27Q9H306 513 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 IL1RAPL2Q9NP60 686 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 PIH1D3Q9NQM4 214 aaKnown RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 TCP11L1Q9NUJ3 509 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 FAM118AQ9NWS6 357 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 CRNNQ9UBG3 495 aaPredicted RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 GAGE2DQ9UEU5 116 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 DDX25Q9UHL0 483 aaKnown RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 PLAGL1Q9UM63 463 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 GAB2Q9UQC2 676 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 ZNF148Q9UQR1 794 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 ZNF142P52746 1687 aaPredicted RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 ADGBQ8N7X0 1667 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 TP53BP1Q12888 1972 aaPredicted RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 PRDM15P57071 1507 aaPredicted RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 CDK12Q9NYV4 1490 aaPredicted RBP3.03□□□□□ -1.93
HERC4-215ENST00000515753 ABCC5O15440 1437 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 NOS1P29475 1434 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 CDC42BPBQ9Y5S2 1711 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 LRPPRCP42704 1394 aaKnown RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 IGSF1Q8N6C5 1336 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 A0A087WV48 116 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 EDDM13A0A1B0GTR0 161 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 A0A1B0GVY2 172 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 A0A1W2PPI3 338 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 LRRD1A4D1F6 860 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 A4D1N5 150 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 TMEM8BA6NDV4 472 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 C5orf60A6NFR6 353 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 OR6C76A6NM76 312 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ANXA2P2A6NMY6 339 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 DNM1LO00429 736 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 DVL1O14640 695 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 CPLX1O14810 134 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 OGG1O15527 345 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ZBTB14O43829 449 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 CTSVO60911 334 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 WISP2O76076 250 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 BAG4O95429 457 aaKnown RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 APOHP02749 345 aaPredicted RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 SUPT20HL2P0C7V6 817 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 FAM200BP0CF97 657 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 MC5RP33032 325 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 MATR3P43243 847 aaKnown RBP eCLIP3.02□□□□□ -1.93
HERC4-215ENST00000515753 TUBB4BP68371 445 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 RALGDSQ12967 914 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ZNF273Q14593 569 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 KIR2DS3Q14952 304 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 TWISTNBQ3B726 338 aaPredicted RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 IGSF11Q5DX21 431 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ZRANB3Q5FWF4 1079 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 NHSL2Q5HYW2 709 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 CCDC158Q5M9N0 1113 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 OTOAQ7RTW8 1153 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 TUSC5Q8IXB3 177 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 SIX6OS1Q8N1H7 587 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 EMC1Q8N766 993 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ATAD1Q8NBU5 361 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 HJURPQ8NCD3 748 aaPredicted RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 LRRC8CQ8TDW0 803 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 UTP15Q8TED0 518 aaKnown RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 PPP4R1Q8TF05 950 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 KCNE4Q8WWG9 221 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 LPGAT1Q92604 370 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ATP6V0A1Q93050 837 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ALG14Q96F25 216 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ST6GAL2Q96JF0 529 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 ATP6V0BQ99437 205 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 GFI1Q99684 422 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 POLR3CQ9BUI4 534 aaPredicted RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 MMADHCQ9H3L0 296 aaPredicted RBP3.02□□□□□ -1.93
HERC4-215ENST00000515753 MID1IP1Q9NPA3 183 aa3.02□□□□□ -1.93
HERC4-215ENST00000515753 PDRG1Q9NUG6 133 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms