RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TARM1B6A8C7 271 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 E7EQ34 232 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 H3BMH7 237 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 AHSGP02765 367 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 KLK3P07288 261 aaPredicted RBP12.31□□□□□ -0.44
CLCN3-210ENST00000515420 MAGP20916 626 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 GABRB3P28472 473 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 DLSTP36957 453 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 CARSP49589 748 aaKnown RBP12.31□□□□□ -0.44
CLCN3-210ENST00000515420 RGS4P49798 205 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 MGAT5Q09328 741 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 SP140Q13342 867 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 ZIC1Q15915 447 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 TAF1BQ53T94 588 aaPredicted RBP12.31□□□□□ -0.44
CLCN3-210ENST00000515420 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.31□□□□□ -0.44
CLCN3-210ENST00000515420 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 DNAJC22Q8N4W6 341 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 FBXO36Q8NEA4 188 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 SLC39A7Q92504 469 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 ZUFSPQ96AP4 578 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
CLCN3-210ENST00000515420 PWWP2AQ96N64 755 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 IL17FQ96PD4 163 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 FAM60AQ9NP50 221 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 PPANQ9NQ55 473 aaKnown RBP12.31□□□□□ -0.44
CLCN3-210ENST00000515420 MOCS1Q9NZB8 636 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 GRHL1Q9NZI5 618 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 SRPK3Q9UPE1 567 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 PLCL2Q9UPR0 1127 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
CLCN3-210ENST00000515420 HEATR5BQ9P2D3 2071 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 A0A1W2PPV9 198 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 EIF4E1BA6NMX2 242 aaKnown RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 KIF2AO00139 706 aaPredicted RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 ZBTB14O43829 449 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 NTRK1P04629 796 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 F7P08709 466 aaPredicted RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 RORAP35398 523 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 TIAL1Q01085 375 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CDC20Q12834 499 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 GPS2Q13227 327 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 DNASE1L3Q13609 305 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CUL1Q13616 776 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 SF1Q15637 639 aaKnown RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 WHAMMP3Q1A5X7 153 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CCSMST1Q4G0I0 132 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 ZC3H12BQ5HYM0 836 aaKnown RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 RHBDD2Q6NTF9 364 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 TLDC1Q6P9B6 456 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 TRMT10BQ6PF06 316 aaKnown RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CYHR1Q6ZMK1 362 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CYS1Q717R9 158 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 ZBED8Q8IZ13 594 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 DSELQ8IZU8 1212 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 OR2A1Q8NGT9 310 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 FAM45AQ8TCE6 357 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CT55Q8WUE5 264 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 SMPDL3AQ92484 453 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 KLHL25Q9H0H3 589 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 DPH5Q9H2P9 285 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.3□□□□□ -0.44
CLCN3-210ENST00000515420 ANKMY1Q9P2S6 941 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 CIDEBQ9UHD4 219 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 IL17BQ9UHF5 180 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 FER1L5A0AVI2 2057 aa12.3□□□□□ -0.44
CLCN3-210ENST00000515420 MEN1O00255 615 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 SLC16A5O15375 505 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 OR2B3O76000 313 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 C8GP07360 202 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 GSTA2P09210 222 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 RAB40ALP0C0E4 278 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 SFTPCP11686 197 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 TCN2P20062 427 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 FDXRP22570 491 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 F8A1P23610 371 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 FASTKD3Q14CZ7 662 aaKnown RBP12.29□□□□□ -0.44
CLCN3-210ENST00000515420 HP1BP3Q5SSJ5 553 aaPredicted RBP12.29□□□□□ -0.44
CLCN3-210ENST00000515420 RBM20Q5T481 1227 aaKnown RBP12.29□□□□□ -0.44
CLCN3-210ENST00000515420 FIGLAQ6QHK4 219 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 TAX1BP1Q86VP1 789 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 ANKMY2Q8IV38 441 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 CPNE9Q8IYJ1 553 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 SLC38A9Q8NBW4 561 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 OR2L3Q8NG85 312 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 PROKR1Q8TCW9 393 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 CLIP3Q96DZ5 547 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 PKP4Q99569 1192 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 NDNQ99608 321 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 C17orf62Q9BQA9 187 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 PCMTD2Q9NV79 361 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 EURLQ9NYK6 297 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 KALRNO60229 2985 aa12.29□□□□□ -0.44
CLCN3-210ENST00000515420 ZSCAN9O15535 394 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ZNF749O43361 778 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 CREG1O75629 220 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 CCNDBP1O95273 360 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms