RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 XKR6Q5GH73 641 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 PAGE2BQ5JRK9 111 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 C10orf62Q5T681 223 aaPredicted RBP15.52■□□□□ 0.08
NUP54-214ENST00000514307 THEMIS2Q5TEJ8 643 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 LETMD1Q6P1Q0 360 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 IL27RAQ6UWB1 636 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 GPBAR1Q8TDU6 330 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 UBE2E3Q969T4 207 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 REPS1Q96D71 796 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 CDK15Q96Q40 435 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 KCNA7Q96RP8 456 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 CCDC106Q9BWC9 280 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 EHD1Q9H4M9 534 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 ELOVL6Q9H5J4 265 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 AKTIPQ9H8T0 292 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 CCDC177Q9NQR7 707 aaPredicted RBP15.52■□□□□ 0.08
NUP54-214ENST00000514307 PRDM8Q9NQV8 689 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 IMP3Q9NV31 184 aaKnown RBP15.52■□□□□ 0.08
NUP54-214ENST00000514307 DLGAP2Q9P1A6 1054 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 ZNF225Q9UK10 706 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 SERTM1A2A2V5 107 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 MANBAO00462 879 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 DCXO43602 365 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 WFS1O76024 890 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 MTHFD1P11586 935 aaKnown RBP15.51■□□□□ 0.07
NUP54-214ENST00000514307 JUPP14923 745 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 CALB2P22676 271 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 PRDX6P30041 224 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 ACTR1BP42025 376 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 ATP4BP51164 291 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 FOXA1P55317 472 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 ACTR1AP61163 376 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 STX1BP61266 288 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 GRIK2Q13002 908 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 MAD2L1Q13257 205 aaPredicted RBP15.51■□□□□ 0.07
NUP54-214ENST00000514307 FZD2Q14332 565 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 CLCA4Q14CN2 919 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 ZXDCQ2QGD7 858 aaPredicted RBP15.51■□□□□ 0.07
NUP54-214ENST00000514307 LCTLQ6UWM7 567 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 CHSY3Q70JA7 882 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 TRIM46Q7Z4K8 759 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 PARGQ86W56 976 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 SDR16C5Q8N3Y7 309 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 DEFB119Q8N690 84 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 DNASE2BQ8WZ79 361 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 CXorf40BQ96DE9 158 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 PDXPQ96GD0 296 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 PPP3R2Q96LZ3 170 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 ORAI3Q9BRQ5 295 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 TMEM168Q9H0V1 697 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 MIR1-1HGQ9H1L0 117 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 GPR27Q9NS67 375 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 NMRK1Q9NWW6 199 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 TAGLN3Q9UI15 199 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 ZNF490Q9ULM2 529 aaPredicted RBP15.51■□□□□ 0.07
NUP54-214ENST00000514307 WDR37Q9Y2I8 494 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 PCDHGA11Q9Y5H2 935 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 CAPN7Q9Y6W3 813 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 ATG2BQ96BY7 2078 aa15.51■□□□□ 0.07
NUP54-214ENST00000514307 CAPN14A8MX76 684 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 PRR5-ARHGAP8B1AHC4 643 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 UNC5CO95185 931 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 C1GALT1C1LP0DN25 315 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 CXCR2P25025 360 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 TSTA3Q13630 321 aaPredicted RBP15.5■□□□□ 0.07
NUP54-214ENST00000514307 CPSF6Q16630 551 aaKnown RBP eCLIP15.5■□□□□ 0.07
NUP54-214ENST00000514307 GSTA3Q16772 222 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 IMPG1Q17R60 797 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 ATP6AP1LQ52LC2 224 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 TAF8Q7Z7C8 310 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 WDR5BQ86VZ2 330 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 HMGCLL1Q8TB92 370 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 PTCD3Q96EY7 689 aaKnown RBP15.5■□□□□ 0.07
NUP54-214ENST00000514307 SLC6A18Q96N87 628 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 EFCAB11Q9BUY7 163 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 TUBB1Q9H4B7 451 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 KIR3DX1Q9H7L2 352 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 TMEM45AQ9NWC5 275 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 TBC1D29Q9UFV1 150 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 BTRCQ9Y297 605 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 ST14Q9Y5Y6 855 aa15.5■□□□□ 0.07
NUP54-214ENST00000514307 CFAP20Q9Y6A4 193 aaKnown RBP15.5■□□□□ 0.07
NUP54-214ENST00000514307 NCOR1O75376 2440 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 KIR2DS5A0A0G2JLQ3 304 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 A0A0G2JNG1 304 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 A0A1B0GTL3 188 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 ATP6AP2A0A1C7CYW4 349 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 A0A1W2PR77 199 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 H0YIV9 168 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 KIR2DS3K7RE56 304 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 PEX11AO75192 247 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 ATP6AP2O75787 350 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 JUNP05412 331 aaKnown RBP15.49■□□□□ 0.07
NUP54-214ENST00000514307 ERGP11308 486 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 F3P13726 295 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 IDO1P14902 403 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 XRCC1P18887 633 aaPredicted RBP15.49■□□□□ 0.07
NUP54-214ENST00000514307 EPORP19235 508 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 SCTRP47872 440 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 RAB28P51157 221 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms