RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MKRN2Q9H000 416 aaKnown RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 PCDHAC1Q9H158 963 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 OR52A5Q9H2C5 316 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 CMTM6Q9NX76 183 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 GPRC5BQ9NZH0 403 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 ZFR2Q9UPR6 939 aaKnown RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 MTCH2Q9Y6C9 303 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 GPR89AB7ZAQ6 455 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 CASQ2O14958 399 aaPredicted RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 PLRG1O43660 514 aaKnown RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 GPR89BP0CG08 455 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ACADSP16219 412 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 TRIM23P36406 574 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 HNF4AP41235 474 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 CSTF3Q12996 717 aaKnown RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 FGL2Q14314 439 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 PTGR1Q14914 329 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 IRF4Q15306 451 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 XKR6Q5GH73 641 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 HABP4Q5JVS0 413 aaKnown RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 SDE2Q6IQ49 451 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 GRHL2Q6ISB3 625 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 TLDC1Q6P9B6 456 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 SUSD1Q6UWL2 747 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 FAM83HQ6ZRV2 1179 aaPredicted RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 PDZD3Q86UT5 571 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 LRRTM4Q86VH4 590 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 IL17RCQ8NAC3 791 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 TP53I13Q8NBR0 393 aaPredicted RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 OR9A1PQ8NGU1 263 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 WDR20Q8TBZ3 569 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ZNF480Q8WV37 535 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 TMEM125Q96AQ2 219 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ZBTB18Q99592 522 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 LGR4Q9BXB1 951 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ZDHHC5Q9C0B5 715 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 TRPV5Q9NQA5 729 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 C6orf203Q9P0P8 240 aaPredicted RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 TMED5Q9Y3A6 229 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 DNMT3AQ9Y6K1 912 aaPredicted RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 XIRP2A4UGR9 3374 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 C15orf38-AP3S2A0A0A6YYH1 394 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 H0YIV9 168 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 CLGNO14967 610 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ADAM23O75077 832 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 EGFP01133 1207 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 BCKDHAP12694 445 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ATP6V1C1P21283 382 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 CASP2P42575 452 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 NEK2P51955 445 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 RPS21P63220 83 aaKnown RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 DOC2AQ14183 400 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 KIAA1161Q6NSJ0 714 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 DOK6Q6PKX4 331 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ARPINQ7Z6K5 226 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 AMZ2Q86W34 360 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 KBTBD2Q8IY47 623 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 KIAA2013Q8IYS2 634 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 FAM9CQ8IZT9 166 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 PQLC1Q8N2U9 271 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 NAF1Q96HR8 494 aaKnown RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 FCRL1Q96LA6 429 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 C1QTNF2Q9BXJ5 285 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 DPY30Q9C005 99 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 CLMPQ9H6B4 373 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 ITM2CQ9NQX7 267 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 MBNL1Q9NR56 388 aaKnown RBP14.5□□□□□ -0.09
VCAN-211ENST00000513984 FBXL12Q9NXK8 326 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 CIDEBQ9UHD4 219 aa14.5□□□□□ -0.09
VCAN-211ENST00000513984 MYO10Q9HD67 2058 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 PRSS51A0A1B0GVH4 220 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 A0A1W2PQF6 199 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 KLHL33A6NCF5 533 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 DNTTP04053 509 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 PRPS2P11908 318 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 MAPK1P28482 360 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 ATXN3P54252 364 aaPredicted RBP14.49□□□□□ -0.09
VCAN-211ENST00000513984 TBPL1P62380 186 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 YBX1P67809 324 aaKnown RBP14.49□□□□□ -0.09
VCAN-211ENST00000513984 BNIP2Q12982 314 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 INPP5AQ14642 412 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 TMEM259Q4ZIN3 620 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 CAPN13Q6MZZ7 669 aaPredicted RBP14.49□□□□□ -0.09
VCAN-211ENST00000513984 SLC2A7Q6PXP3 512 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 SPATA24Q86W54 205 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 RALGPS2Q86X27 583 aaPredicted RBP14.49□□□□□ -0.09
VCAN-211ENST00000513984 TMEM126BQ8IUX1 230 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 DUS3LQ96G46 650 aaKnown RBP14.49□□□□□ -0.09
VCAN-211ENST00000513984 RSRC1Q96IZ7 334 aaKnown RBP14.49□□□□□ -0.09
VCAN-211ENST00000513984 ZNF184Q99676 751 aaPredicted RBP14.49□□□□□ -0.09
VCAN-211ENST00000513984 SGPP1Q9BX95 441 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 WDR26Q9H7D7 661 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 MCM8Q9UJA3 840 aa14.49□□□□□ -0.09
VCAN-211ENST00000513984 TCRBV3S1A0A5B6 114 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 IL6P05231 212 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 C7P10643 843 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 HSD3B1P14060 373 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 HOXB2P14652 356 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 COL9A1P20849 921 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 HSD3B2P26439 372 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms