RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CCR8P51685 355 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 DSTNP60981 165 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 GLIS1Q8NBF1 620 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 KREMEN2Q8NCW0 462 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 SLC22A18Q96BI1 424 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 ZSCAN5AQ9BUG6 496 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 SRMSQ9H3Y6 488 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 MRPS30Q9NP92 439 aaKnown RBP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 PCDHGB1Q9Y5G3 927 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 CPSF4LA6NMK7 179 aaKnown RBP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 TBX1O43435 398 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 CSNK2A2P19784 350 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 ATP4BP51164 291 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 CRB2Q5IJ48 1285 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 UBAP2Q5T6F2 1119 aaKnown RBP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 KLHDC10Q6PID8 442 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 RASSF6Q6ZTQ3 369 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 TAF8Q7Z7C8 310 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 DBF4BQ8NFT6 615 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 OR8H1Q8NGG4 311 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 CDK15Q96Q40 435 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 OR2AG1Q9H205 316 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 GALPQ9UBC7 116 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 NKX1-2Q9UD57 310 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 LCHNA4D1U4 455 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 XKP51811 444 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 DUOXA1Q1HG43 343 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 KLHL36Q8N4N3 616 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 C7orf43Q8WVR3 580 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 KIAA1191Q96A73 305 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 C12orf66Q96MD2 445 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 NPY6RQ99463 290 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 GPR88Q9GZN0 384 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 P2RX2Q9UBL9 471 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 HS3ST4Q9Y661 456 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 TRBV23OR9-2A0A075B6M9 112 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 DNAJB13P59910 316 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 ABHD18Q0P651 414 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 SLBPQ14493 270 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL11A1-210ENST00000512756 POMZP3Q6PJE2 187 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 BRAT1Q6PJG6 821 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 GDPD4Q6W3E5 623 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 FAM129CQ86XR2 697 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 SLC35A5Q9BS91 424 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 OR51V1Q9H2C8 321 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 TCF7L1Q9HCS4 588 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 TMEM9Q9P0T7 183 aa12.2□□□□□ -0.46
COL11A1-210ENST00000512756 ANXA2P2A6NMY6 339 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 AGRPO00253 132 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 ACOX3O15254 700 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 NOS1APO75052 506 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 ANXA2P07355 339 aaKnown RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TUBA1BP68363 451 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PGBD2Q6P3X8 592 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TUBA1AQ71U36 451 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 RIT1Q92963 219 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 KCTD7Q96MP8 289 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PKP2Q99959 881 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 SLC22A4Q9H015 551 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 MON2Q7Z3U7 1717 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TOR1BO14657 336 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 UGT1A6P19224 532 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 FPR1P21462 350 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 UGT1A1P22309 533 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 UGT1A4P22310 534 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 UGT1A3P35503 534 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 NCBP2P52298 156 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PPIGQ13427 754 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 SERINC3Q13530 473 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PCLAFQ15004 111 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 CARTPTQ16568 116 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PDSS2Q86YH6 399 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 SLITRK4Q8IW52 837 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 GPALPP1Q8IXQ4 340 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 CHST4Q8NCG5 386 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TSPEARQ8WU66 669 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 HERVK_113Q902F9 699 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 DDX1Q92499 740 aaKnown RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 MAPKAP1Q9BPZ7 522 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 MINDY3Q9H8M7 445 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 POPDC3Q9HBV1 291 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PRAMEF33A0A0G2JMD5 474 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PRAMEF10O60809 474 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 ANO7Q6IWH7 933 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 VITQ6UXI7 678 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 ZCCHC10Q8TBK6 192 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TP53INP1Q96A56 240 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 RGMAQ96B86 450 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 NUS1Q96E22 293 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 MKKSQ9NPJ1 570 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 C14orf105Q9NVL8 296 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 FAM120CQ9NX05 1096 aaKnown RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 SIRPGQ9P1W8 387 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 SPIN1Q9Y657 262 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 GMEB1Q9Y692 573 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms