RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PLEKHS1Q5SXH7 462 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 CERS6Q6ZMG9 384 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 ZNF517Q6ZMY9 492 aaPredicted RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 ARHGEF18Q6ZSZ5 1173 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 MED25Q71SY5 747 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 FAM214BQ7L5A3 538 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 TAS2R42Q7RTR8 314 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 GPR135Q8IZ08 494 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 DSELQ8IZU8 1212 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 ENDOVQ8N8Q3 282 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 OR13C4Q8NGS5 318 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 CPT1CQ8TCG5 803 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 KRT35Q92764 455 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 N4BP2L2Q92802 583 aaPredicted RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.96□□□□□ -1.3
USP46-208ENST00000512656 IP6K3Q96PC2 410 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 APOL2Q9BQE5 337 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 TLR10Q9BXR5 811 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 TRIM55Q9BYV6 548 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 OSBPL8Q9BZF1 889 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 TRIM5Q9C035 493 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 CHST8Q9H2A9 424 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 GOLPH3Q9H4A6 298 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 TFB2MQ9H5Q4 396 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 AKIRIN1Q9H9L7 192 aaPredicted RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 ARNT2Q9HBZ2 717 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 TCFL5Q9UL49 500 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 PADI2Q9Y2J8 665 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 ZNF106Q9H2Y7 1883 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 IGLV3-16A0A075B6K0 115 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 TMEM150CB9EJG8 249 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 E7EQ34 232 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 PSMD3O43242 534 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 SGTAO43765 313 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 DNAJB5O75953 348 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 TMEM63AO94886 807 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 AP2A2O94973 939 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 AGFG2O95081 481 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 RNASE1P07998 156 aaKnown RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 ACRV1P26436 265 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 PRDX3P30048 256 aaKnown RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 MC4RP32245 332 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 VAV2P52735 878 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 ZNF140P52738 457 aaPredicted RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 TMPRSS15P98073 1019 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 PLOD1Q02809 727 aaPredicted RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 CACNG1Q06432 222 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 IL10RAQ13651 578 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 LAMB3Q13751 1172 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 PARP6Q2NL67 630 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 P3H1Q32P28 736 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 ZRANB3Q5FWF4 1079 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 FHL5Q5TD97 284 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 PAPD7Q5XG87 772 aaKnown RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 CPZQ66K79 652 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 FBXO38Q6PIJ6 1188 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 SERPINA9Q86WD7 417 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 AMIGO1Q86WK6 493 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 RAB43Q86YS6 212 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 TMTC1Q8IUR5 882 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 SYTL1Q8IYJ3 562 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 TC2NQ8N9U0 490 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 OR52E1Q8NGJ3 308 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 ASB11Q8WXH4 323 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 TFGQ92734 400 aaPredicted RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 TCTN2Q96GX1 697 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 FRMD6Q96NE9 622 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 RUFY1Q96T51 708 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 TTC1Q99614 292 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 DHRS4Q9BTZ2 278 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 PITPNM3Q9BZ71 974 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 SLC29A3Q9BZD2 475 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 OR52A5Q9H2C5 316 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 C10orf88Q9H8K7 445 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 LRRC40Q9H9A6 602 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 COG4Q9H9E3 785 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 MLXIPLQ9NP71 852 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 SLAMF7Q9NQ25 335 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 MBNL3Q9NUK0 354 aaKnown RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 POLG2Q9UHN1 485 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 EPN1Q9Y6I3 576 aaPredicted RBP6.95□□□□□ -1.3
USP46-208ENST00000512656 AP1M2Q9Y6Q5 423 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 U3KQE9 123 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 CREBBPQ92793 2442 aa6.95□□□□□ -1.3
USP46-208ENST00000512656 TRBV5-4A0A0C4DH59 114 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 BLACEA4D250 179 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 BTNL10A8MVZ5 291 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 H7C0S8 307 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 BTN3A3O00478 584 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 BTN3A1O00481 513 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 LIN7AO14910 233 aaPredicted RBP6.94□□□□□ -1.3
USP46-208ENST00000512656 ZNF749O43361 778 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 LDB2O43679 373 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 CEACAM4O75871 244 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 GAS8O95995 478 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 FTH1P02794 183 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ALPPP05187 535 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ST6GAL1P15907 406 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms