RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 UCK1Q9HA47 277 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CCM2LQ9NUG4 571 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 PKD2L2Q9NZM6 624 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 TRIM10Q9UDY6 481 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 PLEKHB1Q9UF11 243 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 TMPRSS11EQ9UL52 423 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 DNPEPQ9ULA0 475 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 RPL26L1Q9UNX3 145 aaKnown RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 WDR37Q9Y2I8 494 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 NUP210LQ5VU65 1888 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 IGHV5-51A0A0C4DH38 117 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 AGFG2O95081 481 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 SLC25A14O95258 325 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 JCHAINP01591 159 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 LPLP06858 475 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 ZNF7P17097 686 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 AMD1P17707 334 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CA4P22748 312 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CASP14P31944 242 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 SSR1P43307 286 aaKnown RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 MANFP55145 182 aaKnown RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 TAS2R40P59535 323 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 DCDC1P59894 354 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 SEMA5AQ13591 1074 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 IL11RAQ14626 422 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CCDC122Q5T0U0 273 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CACHD1Q5VU97 1274 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 FAM69BQ5VUD6 431 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 TIGD7Q6NT04 549 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 PWWP2BQ6NUJ5 590 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 SASS6Q6UVJ0 657 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CD300LDQ6UXZ3 194 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 ETV3LQ6ZN32 361 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 FRMD7Q6ZUT3 714 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 LRRTM4Q86VH4 590 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 PPP1R3BQ86XI6 285 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 LRRC49Q8IUZ0 686 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 HIPK4Q8NE63 616 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CPT1CQ8TCG5 803 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 FAM168AQ92567 244 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 FATE1Q969F0 183 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 GLYATL1Q969I3 302 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 FAF2Q96CS3 445 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 NAP1L5Q96NT1 182 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 TSGA13Q96PP4 275 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 TRIB3Q96RU7 358 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 DIRC2Q96SL1 478 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 ZNF670Q9BS34 389 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 TIMM29Q9BSF4 260 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 MLPHQ9BV36 600 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 SGPP1Q9BX95 441 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CNTD2Q9H8S5 307 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 SLC40A1Q9NP59 571 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 LHX9Q9NQ69 397 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 LUZP4Q9P127 313 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 NFKBIL1Q9UBC1 381 aaPredicted RBP6.49□□□□□ -1.37
COPS4-209ENST00000511653 IP6K2Q9UHH9 426 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 AMACRQ9UHK6 382 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 KCND3Q9UK17 655 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 ZNF711Q9Y462 761 aa6.49□□□□□ -1.37
COPS4-209ENST00000511653 CROCCQ5TZA2 2017 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 A0A087X0T9 212 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 A1L4Q6 167 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 RGSL1A5PLK6 1076 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 TOX3O15405 576 aaPredicted RBP6.48□□□□□ -1.37
COPS4-209ENST00000511653 SORBS2O94875 1100 aaKnown RBP6.48□□□□□ -1.37
COPS4-209ENST00000511653 CYP1A2P05177 515 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 FAM228BP0C875 321 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 EBLN1P0CF75 366 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 FOLR1P15328 257 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 NELFEP18615 380 aaKnown RBP6.48□□□□□ -1.37
COPS4-209ENST00000511653 CCNCP24863 283 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 CA5AP35218 305 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 SRSF3P84103 164 aaKnown RBP6.48□□□□□ -1.37
COPS4-209ENST00000511653 SRSF2Q01130 221 aaKnown RBP6.48□□□□□ -1.37
COPS4-209ENST00000511653 TUBB3Q13509 450 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 ANO6Q4KMQ2 910 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 CCDC183Q5T5S1 534 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 ABRAXAS1Q6UWZ7 409 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 CLEC17AQ6ZS10 378 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 LYSMD2Q8IV50 215 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 APLFQ8IW19 511 aaPredicted RBP6.48□□□□□ -1.37
COPS4-209ENST00000511653 TRAM1L1Q8N609 369 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 AVL9Q8NBF6 648 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 CCHCR1Q8TD31 782 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 HDAC11Q96DB2 347 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 ZSCAN5AQ9BUG6 496 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 POT1Q9NUX5 634 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 PADI1Q9ULC6 663 aa6.48□□□□□ -1.37
COPS4-209ENST00000511653 LUC7L2Q9Y383 392 aaKnown RBP6.48□□□□□ -1.37
COPS4-209ENST00000511653 UBA6A0AVT1 1052 aaPredicted RBP6.47□□□□□ -1.37
COPS4-209ENST00000511653 ARGFXA6NJG6 315 aa6.47□□□□□ -1.37
COPS4-209ENST00000511653 ZNF839A8K0R7 811 aa6.47□□□□□ -1.37
COPS4-209ENST00000511653 C21orf140B9A014 251 aa6.47□□□□□ -1.37
COPS4-209ENST00000511653 KMOO15229 486 aa6.47□□□□□ -1.37
COPS4-209ENST00000511653 VPS4BO75351 444 aa6.47□□□□□ -1.37
COPS4-209ENST00000511653 APOL3O95236 402 aa6.47□□□□□ -1.37
COPS4-209ENST00000511653 IL18BPO95998 194 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms