RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 HIST1H2ADP20671 130 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 CYP2A7P20853 494 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 OAS2P29728 719 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 ECHS1P30084 290 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 PEBP1P30086 187 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 PGGT1BP53609 377 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 PNLIPRP1P54315 467 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 TAS2R39P59534 338 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 GPS2Q13227 327 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 CLN3Q13286 438 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SP140Q13342 867 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 FASTKQ14296 549 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 USP10Q14694 798 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SLMAPQ14BN4 828 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 KIF26BQ2KJY2 2108 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 BROXQ5VW32 411 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 EMBQ6PCB8 327 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 TMEM207Q6UWW9 146 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 TRIM73Q86UV7 250 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 ZFAND4Q86XD8 727 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 DTX1Q86Y01 620 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SPACA3Q8IXA5 215 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 NKAPQ8N5F7 415 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 EIF1ADQ8N9N8 165 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 LMNTD1Q8N9Z9 388 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 DENND1AQ8TEH3 1009 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SMPDL3AQ92484 453 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 ZUFSPQ96AP4 578 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 ZNF501Q96CX3 271 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 TSPAN17Q96FV3 270 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 PDLIM5Q96HC4 596 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 HIST1H2AHQ96KK5 128 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 CCDC138Q96M89 665 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 CYTH2Q99418 400 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 GPR22Q99680 433 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 RBBP8Q99708 897 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 HIST1H2AJQ99878 128 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 H2AFJQ9BTM1 129 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SLC12A9Q9BXP2 914 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 TRIM54Q9BYV2 358 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 ULBP3Q9BZM4 244 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SPRY4Q9C004 299 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 CHRNA10Q9GZZ6 450 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 KLHL25Q9H0H3 589 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 CDC42EP4Q9H3Q1 356 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 FANCEQ9HB96 536 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 POPDC3Q9HBV1 291 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 GPAMQ9HCL2 828 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 INTS7Q9NVH2 962 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 WDR70Q9NW82 654 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 NINJ2Q9NZG7 142 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 SERTAD3Q9UJW9 196 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 PILRAQ9UKJ1 303 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 NFU1Q9UMS0 254 aa6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 MTO1Q9Y2Z2 717 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-215ENST00000511586 ASPMQ8IZT6 3477 aa6.9□□□□□ -1.31
PDLIM5-215ENST00000511586 AKAP13Q12802 2813 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 A0A1W2PPV9 198 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 TARM1B6A8C7 271 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 E7ENX8 843 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 RRP9O43818 475 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 FAM155BO75949 473 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 STK17BO94768 372 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 KIAA0754O94854 1291 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 ACSL3O95573 720 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 ENO2P09104 434 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 MYBL2P10244 700 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 STMN1P16949 149 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 ITPKBP27987 946 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 CMPK1P30085 196 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 RPA3P35244 121 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 ATP1A2P50993 1020 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 UCNP55089 124 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 TAP2Q03519 686 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 TLE3Q04726 772 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 TSTA3Q13630 321 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 CASP8Q14790 479 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 NAA25Q14CX7 972 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 TGIF1Q15583 401 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 GPR19Q15760 415 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 ZIC1Q15915 447 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 ZC3H12BQ5HYM0 836 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 BEND6Q5SZJ8 279 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 PWWP2BQ6NUJ5 590 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 FIGLAQ6QHK4 219 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 SUSD1Q6UWL2 747 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 CDHR3Q6ZTQ4 885 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 TRMT10CQ7L0Y3 403 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 CEP97Q8IW35 865 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 FAM20CQ8IXL6 584 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 SYTL1Q8IYJ3 562 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 CACNA2D3Q8IZS8 1091 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 NLGN4XQ8N0W4 816 aa6.89□□□□□ -1.31
PDLIM5-215ENST00000511586 IL22RA1Q8N6P7 574 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms