RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 TMED3Q9Y3Q3 217 aa4.59□□□□□ -1.67
GYPA-205ENST00000508337 PCDH11YQ9BZA8 1340 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 ANTXRLA6NF34 631 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 NR5A2O00482 541 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 OR10H2O60403 315 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 DIAPH2O60879 1101 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 DFFBO76075 338 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 AP2A2O94973 939 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 RAF1P04049 648 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 RAB40ALP0C0E4 278 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 FRMD6-AS1P0C7T7 363 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 MYL6BP14649 208 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 CSTF2P33240 577 aaKnown RBP eCLIP4.58□□□□□ -1.68
GYPA-205ENST00000508337 KRT20P35900 424 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 CCR10P46092 362 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 KLC1Q07866 573 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 WASHC5Q12768 1159 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 SQLEQ14534 574 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 TMEM187Q14656 261 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 UGP2Q16851 508 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 SYT14P1Q58G82 188 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 ARMC4Q5T2S8 1044 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 BSPRYQ5W0U4 402 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 ZNF772Q68DY9 489 aaPredicted RBP4.58□□□□□ -1.68
GYPA-205ENST00000508337 KRT80Q6KB66 452 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 PIGZQ86VD9 579 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 MFN1Q8IWA4 741 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 TRIM58Q8NG06 486 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 OR2T11Q8NH01 316 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 OR4C3Q8NH37 302 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 OR52N5Q8NH56 324 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 DYRK2Q92630 601 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 CCDC47Q96A33 483 aaKnown RBP4.58□□□□□ -1.68
GYPA-205ENST00000508337 SERINC2Q96SA4 455 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 RAD9AQ99638 391 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
GYPA-205ENST00000508337 SYT15Q9BQS2 421 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 DGCR6LQ9BY27 220 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 CHMP4BQ9H444 224 aaKnown RBP4.58□□□□□ -1.68
GYPA-205ENST00000508337 ZNF71Q9NQZ8 489 aaPredicted RBP4.58□□□□□ -1.68
GYPA-205ENST00000508337 MRGBPQ9NV56 204 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 OR6C2Q9NZP2 312 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.58□□□□□ -1.68
GYPA-205ENST00000508337 WDR37Q9Y2I8 494 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 TTLL3Q9Y4R7 772 aa4.58□□□□□ -1.68
GYPA-205ENST00000508337 SOS1Q07889 1333 aaPredicted RBP4.57□□□□□ -1.68
GYPA-205ENST00000508337 TSPY2A6NKD2 308 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 C2orf81A6NN90 581 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 ENO4A6NNW6 628 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 GGPS1O95749 300 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 TSPY3P0CV98 308 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 TSPY8P0CW00 308 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 SMIM18P0DKX4 95 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 PRKAR1AP10644 381 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 ZNF26P17031 533 aaPredicted RBP4.57□□□□□ -1.68
GYPA-205ENST00000508337 TYMPP19971 482 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 OAS2P29728 719 aaKnown RBP4.57□□□□□ -1.68
GYPA-205ENST00000508337 RAD52P43351 418 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 CLK1P49759 484 aaKnown RBP4.57□□□□□ -1.68
GYPA-205ENST00000508337 VEGFCP49767 419 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 IRX1P78414 480 aaPredicted RBP4.57□□□□□ -1.68
GYPA-205ENST00000508337 TSPY1Q01534 308 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 ZNF415Q09FC8 603 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 AIMP1Q12904 312 aaKnown RBP4.57□□□□□ -1.68
GYPA-205ENST00000508337 CUL3Q13618 768 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 E2F5Q15329 346 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 C14orf177Q52M58 125 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 ERMARDQ5T6L9 678 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 SLC30A6Q6NXT4 461 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 BHLHB9Q6PI77 547 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 TMPRSS11BQ86T26 416 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 LGI2Q8N0V4 545 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 ZNF611Q8N823 705 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 KCTD6Q8NC69 237 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 HPSE2Q8WWQ2 592 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 HDAC11Q96DB2 347 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
GYPA-205ENST00000508337 EXOGQ9Y2C4 368 aaKnown RBP4.57□□□□□ -1.68
GYPA-205ENST00000508337 P4HA2O15460 535 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 NXPH2O95156 264 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 NADKO95544 446 aaPredicted RBP4.56□□□□□ -1.68
GYPA-205ENST00000508337 DANCRP0C864 163 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 ZNF883P0CG24 379 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 TRIM49P0CI25 452 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 TRIM49CP0CI26 452 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 IGHV4-31P0DP07 118 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 IRF2P14316 349 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 DEKP35659 375 aaKnown RBP4.56□□□□□ -1.68
GYPA-205ENST00000508337 RAB28P51157 221 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 MAZP56270 477 aaKnown RBP4.56□□□□□ -1.68
GYPA-205ENST00000508337 PTPRCAPQ14761 206 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 TCTE1Q5JU00 501 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 SLC35D3Q5M8T2 416 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 WLSQ5T9L3 541 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 KIRREL3Q8IZU9 778 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 MARVELD2Q8N4S9 558 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 MAPKAPK5-AS1Q8N8E1 139 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 THAP8Q8NA92 274 aa4.56□□□□□ -1.68
GYPA-205ENST00000508337 VANGL1Q8TAA9 524 aaPredicted RBP4.56□□□□□ -1.68
GYPA-205ENST00000508337 ZNF653Q96CK0 615 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms