RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TMC5Q6UXY8 1006 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SPATA31D4Q6ZUB0 917 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 TDRPQ86YL5 185 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 ARL14EPQ8N8R7 260 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 CCNYQ8ND76 341 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 OR56B2PQ8NGI1 322 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 PHOSPHO1Q8TCT1 267 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SMG7Q92540 1137 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 NAT9Q9BTE0 207 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 EDEM2Q9BV94 578 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SLC46A2Q9BY10 475 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SLC39A8Q9C0K1 460 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 OR10A5Q9H207 317 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 GBA3Q9H227 469 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 TRPC7Q9HCX4 862 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 KCMF1Q9P0J7 381 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 BAG5Q9UL15 447 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 A0A087WWL8 130 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 GOLGA8MH3BSY2 632 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 J3KTA2 159 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 RNF103O00237 685 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 LEFTY2O00292 366 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 KLK10O43240 276 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 KDELR3O43731 214 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 LUC7L3O95232 432 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 IL18BPO95998 194 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 GLAP06280 429 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 HMBSP08397 361 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 TGM1P22735 817 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 CHMP24386 653 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 PTPN3P26045 913 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 GCAP28676 217 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 MNAT1P51948 309 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 GEMP55040 296 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 GNA12Q03113 381 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 FRG1Q14331 258 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 GPR68Q15743 365 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 ANKRD22Q5VYY1 191 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 TXNDC8Q6A555 127 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 PDIK1LQ8N165 341 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 NPWQ8N729 165 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 MAB21L3Q8N8X9 362 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SMYD1Q8NB12 490 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 SNX33Q8WV41 574 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 DYDC1Q8WWB3 177 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 PTP4A1Q93096 173 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 IGSF8Q969P0 613 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 TUBGCP3Q96CW5 907 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 TMA16Q96EY4 203 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 TOE1Q96GM8 510 aaKnown RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 FCRL5Q96RD9 977 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 MECRQ9BV79 373 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 PHF7Q9BWX1 381 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-206ENST00000507875 C1QTNF1Q9BXJ1 281 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 KCNK9Q9NPC2 374 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 NMRK1Q9NWW6 199 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 ATPIF1Q9UII2 106 aa6.98□□□□□ -1.29
CLCN3-206ENST00000507875 XIRP2A4UGR9 3374 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 HNRNPCL2B2RXH8 293 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 H3BQ06 376 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-206ENST00000507875 LCE2BO14633 110 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 HNRNPCL1O60812 293 aaKnown RBP6.97□□□□□ -1.29
CLCN3-206ENST00000507875 PRAMEF11O60813 436 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 KLKB1P03952 638 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 CEACAM5P06731 702 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 ACADMP11310 421 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 CCNB1P14635 433 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 OR1E1P30953 314 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 PHBP35232 272 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 PTGS2P35354 604 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 GLRBP48167 497 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 NRIP1P48552 1158 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 NPY2RP49146 381 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 VAMP2P63027 116 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 HYAL1Q12794 435 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 ADAM15Q13444 863 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 MED22Q15528 200 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF77Q15935 545 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 FNBP1LQ5T0N5 605 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 DBX2Q6ZNG2 339 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 CYS1Q717R9 158 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 PIGWQ7Z7B1 504 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 SRRM1Q8IYB3 904 aaKnown RBP6.97□□□□□ -1.29
CLCN3-206ENST00000507875 LRRC34Q8IZ02 419 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF321PQ8N8H1 164 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 OR6Y1Q8NGX8 325 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 LILRB4Q8NHJ6 448 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 PYROXD1Q8WU10 500 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 MS4A7Q9GZW8 240 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-206ENST00000507875 LRRC40Q9H9A6 602 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 GALNT8Q9NY28 637 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 KLHL8Q9P2G9 620 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-206ENST00000507875 IPO11Q9UI26 975 aaKnown RBP6.97□□□□□ -1.29
CLCN3-206ENST00000507875 CUL9Q8IWT3 2517 aa6.97□□□□□ -1.29
CLCN3-206ENST00000507875 TCRBV7S3A2A0A539 114 aa6.96□□□□□ -1.29
CLCN3-206ENST00000507875 MAGEB16A2A368 324 aa6.96□□□□□ -1.29
CLCN3-206ENST00000507875 FAM90A18PA6NE21 464 aa6.96□□□□□ -1.29
CLCN3-206ENST00000507875 FAM90A16PA6NEW6 464 aa6.96□□□□□ -1.29
CLCN3-206ENST00000507875 FAM90A9PA6NNJ1 464 aa6.96□□□□□ -1.29
CLCN3-206ENST00000507875 FAM90A5PA8MXJ8 464 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms