RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SHHQ15465 462 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 MTX3Q5HYI7 312 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 HABP4Q5JVS0 413 aaKnown RBP17.16■□□□□ 0.34
SFXN1-208ENST00000507823 SPANXN4Q5MJ08 99 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 PPP4R4Q6NUP7 873 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 GET4Q7L5D6 327 aaPredicted RBP17.16■□□□□ 0.34
SFXN1-208ENST00000507823 DSG4Q86SJ6 1040 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 RIMKLAQ8IXN7 391 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 AADATQ8N5Z0 425 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 PACRGLQ8N7B6 248 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 EME1Q96AY2 570 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 COQ10BQ9H8M1 238 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 TRIM39Q9HCM9 518 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 MAGEL2Q9UJ55 1249 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 CDH7Q9ULB5 785 aa17.16■□□□□ 0.34
SFXN1-208ENST00000507823 TRANK1O15050 2925 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 KRT87PA6NCN2 255 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 TIPRLO75663 272 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 HSD3B1P14060 373 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 AMD1P17707 334 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 HSD3B2P26439 372 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 IL12RB1P42701 662 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 C21orf58P58505 322 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 RUNX3Q13761 415 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 ENPP2Q13822 863 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 SELPLGQ14242 412 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 TBCELQ5QJ74 424 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 LRIF1Q5T3J3 769 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 INTS11Q5TA45 600 aaKnown RBP17.15■□□□□ 0.34
SFXN1-208ENST00000507823 GRHL2Q6ISB3 625 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 MSRB3Q8IXL7 192 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 KRTCAP2Q8N6L1 136 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 CHFRQ96EP1 664 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 PPM1MQ96MI6 270 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 OR4K3Q96R72 315 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 PKP4Q99569 1192 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 PRSS16Q9NQE7 514 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 SPATA6Q9NWH7 488 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-208ENST00000507823 GPRC5BQ9NZH0 403 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 VAPAQ9P0L0 249 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 GPR34Q9UPC5 381 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 K7ESM1 405 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 FCGR1AP12314 374 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 GJA4P35212 333 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 HNF4AP41235 474 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 OR4D2P58180 307 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 PLOD1Q02809 727 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-208ENST00000507823 MAPKAPK3Q16644 382 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 CAPRIN2Q6IMN6 1127 aaKnown RBP17.15■□□□□ 0.34
SFXN1-208ENST00000507823 MTFMTQ96DP5 389 aaKnown RBP17.15■□□□□ 0.34
SFXN1-208ENST00000507823 C11orf24Q96F05 449 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-208ENST00000507823 FOPNLQ96NB1 174 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 ZNF583Q96ND8 569 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 RPF2Q9H7B2 306 aaKnown RBP17.15■□□□□ 0.34
SFXN1-208ENST00000507823 FADS3Q9Y5Q0 445 aa17.15■□□□□ 0.34
SFXN1-208ENST00000507823 C1QTNF3-AMACRE9PGA6 284 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 VEGFDO43915 354 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 C1orf105O95561 183 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 SDC1P18827 310 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 PDHA2P29803 388 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 OXTRP30559 389 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 NEK2P51955 445 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 CHN2P52757 468 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 IRF8Q02556 426 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 CCSMST1Q4G0I0 132 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 SLC44A4Q53GD3 710 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 RUNDC3AQ59EK9 446 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 NAIF1Q69YI7 327 aaPredicted RBP17.14■□□□□ 0.33
SFXN1-208ENST00000507823 OR52E4Q8NGH9 312 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 FAM110BQ8TC76 370 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 SEMA6AQ9H2E6 1030 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 C7orf72A4D263 438 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 DFNA5O60443 496 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 PRMT3O60678 531 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 MMP20O60882 483 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 ERN1O75460 977 aaKnown RBP17.14■□□□□ 0.33
SFXN1-208ENST00000507823 MTHFD1P11586 935 aaKnown RBP17.14■□□□□ 0.33
SFXN1-208ENST00000507823 PBX2P40425 430 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 HALP42357 657 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 GPR1P46091 355 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 PHC1P78364 1004 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 PRKCQQ04759 706 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 AMIGO2Q86SJ2 522 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 CSGALNACT1Q8TDX6 532 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 SUSD6Q92537 303 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 WDR34Q96EX3 536 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 APIPQ96GX9 242 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 COX14Q96I36 57 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 KCNH6Q9H252 994 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 BRF2Q9HAW0 419 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 SERHLQ9NQF3 203 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 C8orf4Q9NR00 106 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 SLC25A37Q9NYZ2 338 aa17.14■□□□□ 0.33
SFXN1-208ENST00000507823 H3BM21 787 aa17.13■□□□□ 0.33
SFXN1-208ENST00000507823 SLC16A8O95907 504 aa17.13■□□□□ 0.33
SFXN1-208ENST00000507823 GGT1P19440 569 aa17.13■□□□□ 0.33
SFXN1-208ENST00000507823 P2RY2P41231 377 aa17.13■□□□□ 0.33
SFXN1-208ENST00000507823 BDKRB1P46663 353 aa17.13■□□□□ 0.33
SFXN1-208ENST00000507823 MTAPQ13126 283 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms