RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 OR10H5Q8NGA6 315 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 LMO3Q8TAP4 145 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 FAM216AQ8WUB2 273 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF606Q8WXB4 792 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 GCDHQ92947 438 aaPredicted RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ISL2Q96A47 359 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 TBC1D31Q96DN5 1066 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 RBMXL1Q96E39 390 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF354BQ96LW1 612 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 KREMEN1Q96MU8 473 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PSKH2Q96QS6 385 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 OR2A14Q96R47 310 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 SMC6Q96SB8 1091 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 C7orf25Q9BPX7 421 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 DEFB127Q9H1M4 99 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 DEF6Q9H4E7 631 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 NOD2Q9HC29 1040 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 EML4Q9HC35 981 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 DEPPQ9NTK1 212 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 IMP3Q9NV31 184 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 GALNT8Q9NY28 637 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF629Q9UEG4 869 aaPredicted RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 MTRF1LQ9UGC7 380 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 TEKT2Q9UIF3 430 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PCDHB4Q9Y5E5 795 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 MAU2Q9Y6X3 613 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 KIAA1109Q2LD37 5005 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 EXPH5Q8NEV8 1989 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 IGHV3-20A0A0C4DH32 117 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 A0A0G2JMM0 328 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 A0A1W2PPB8 328 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 A0A1W2PQ67 120 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 A0A1W2PRS3 328 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 HYKKA2RU49 373 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 FITM1A5D6W6 292 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ELOA3DA6NLF2 546 aaPredicted RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 A8MUI8 341 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 KIR3DP1A8MWS1 328 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 MATN2O00339 956 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 FOXN3O00409 490 aaPredicted RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 AQP7O14520 342 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 FFAR3O14843 346 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 GPR42O15529 346 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ACTN4O43707 911 aaKnown RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 PEX1O43933 1283 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 PALMO75781 387 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 SUN1O94901 812 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 GLSO94925 669 aaPredicted RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 SLC25A14O95258 325 aaPredicted RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 YEATS4O95619 227 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 F13A1P00488 732 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 SERPINC1P01008 464 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CELA3AP09093 270 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC166P0CW27 439 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ICAM2P13598 275 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 UGT2B7P16662 529 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 SYT1P21579 422 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CRYGSP22914 178 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 NR2F2P24468 414 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 TBXAS1P24557 533 aaPredicted RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 PEBP1P30086 187 aaKnown RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CCKARP32238 428 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 IDUAP35475 653 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 MC3RP41968 323 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 HALP42357 657 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 EMP2P54851 167 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 KRT85P78386 507 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 OCRLQ01968 901 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 SLC10A7Q0GE19 358 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 LRMPQ12912 555 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 MEP1AQ16819 746 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ELOA3BQ3SY89 546 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC14Q49A88 953 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 VWA3BQ502W6 1294 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ZCWPW2Q504Y3 356 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ZC3H12BQ5HYM0 836 aaKnown RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 METRNLQ641Q3 311 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 C11orf87Q6NUJ2 197 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ARMC6Q6NXE6 501 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 KIAA0408Q6ZU52 694 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 C1QL4Q86Z23 238 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ARHGEF19Q8IW93 802 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 LILRA3Q8N6C8 439 aaPredicted RBP3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC185Q8N715 623 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 PDILTQ8N807 584 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ELOA3Q8NG57 546 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CREB3L4Q8TEY5 395 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 TMEM171Q8WVE6 324 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 DLG3Q92796 817 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 GLYATL1Q969I3 302 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 MIEF2Q96C03 454 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 PIK3IP1Q96FE7 263 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 ART5Q96L15 291 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 RMDN2Q96LZ7 410 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 CFAP57Q96MR6 1250 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 WFIKKN1Q96NZ8 548 aa3.12□□□□□ -1.91
TCOF1-208ENST00000506063 NUDCD1Q96RS6 583 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms