RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PROK1P58294 105 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 MAT1AQ00266 395 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 AKAP17AQ02040 695 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 EGR4Q05215 589 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SULT2A1Q06520 285 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 KLHL30Q0D2K2 578 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 TSTA3Q13630 321 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 HNF4GQ14541 408 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM35AQ53FP2 167 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 PAPPA-AS1Q5QFB9 102 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 TEX35Q5T0J7 233 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 KCTD11Q693B1 232 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 OLFM4Q6UX06 510 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 LINGO4Q6UY18 593 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCNI2Q6ZMN8 369 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF517Q6ZMY9 492 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 ARHGAP22Q7Z5H3 698 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 C1QL2Q7Z5L3 287 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 NUDT13Q86X67 352 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SERPINA12Q8IW75 414 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 KDM8Q8N371 416 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM199Q8N511 208 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 GBGT1Q8N5D6 347 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 ARFGAP1Q8N6T3 406 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 RASGEF1AQ8N9B8 481 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 THAP8Q8NA92 274 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 EXOC6Q8TAG9 804 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 DAZLQ92904 295 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM186Q96B77 213 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 MTBPQ96DY7 904 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF560Q96MR9 790 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 C17orf62Q9BQA9 187 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 QTRT1Q9BXR0 403 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 PANK2Q9BZ23 570 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 S1PR5Q9H228 398 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 B3GAT1Q9P2W7 334 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 AGO1Q9UL18 857 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 FZD10Q9ULW2 581 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 AURKCQ9UQB9 309 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SNX9Q9Y5X1 595 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SPIN1Q9Y657 262 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 DHX29Q7Z478 1369 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 C5orf51A6NDU8 294 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 ARHGAP42A6NI28 874 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 BECN2A8MW95 431 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 K7EPI3 171 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 HMMRO75330 724 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 MOCS2O96007 188 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 GSRP00390 522 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 SMIM18P0DKX4 95 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 GHRP10912 638 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 HAPLN1P10915 354 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 AREGP15514 252 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 FERP16591 822 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 KELP23276 732 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 GSDMDP57764 484 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRAF1Q13077 416 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 OASLQ15646 514 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 STXBP2Q15833 593 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCDC40Q4G0X9 1142 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 ELFN2Q5R3F8 820 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM69BQ5VUD6 431 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRNP1Q6NT89 227 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 PSRC1Q6PGN9 363 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 UNC5DQ6UXZ4 953 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 ARMC9Q7Z3E5 817 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 YTHDF3Q7Z739 585 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 MEX3DQ86XN8 651 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 AQP12AQ8IXF9 295 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 CFAP206Q8IYR0 622 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF34Q8IZ26 560 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 RNF113BQ8IZP6 322 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 ARHGAP24Q8N264 748 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 KIAA0895Q8NCT3 520 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 RNF128Q8TEB7 428 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC38A5Q8WUX1 472 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM255BQ8WV15 326 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 P2RX5Q93086 422 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 PHF21AQ96BD5 680 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 COQ8BQ96D53 544 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 THOC1Q96FV9 657 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 URB1-AS1Q96HZ7 61 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM213AQ9BRX8 229 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC25A33Q9BSK2 321 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 IDI2Q9BXS1 227 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 TM6SF1Q9BZW5 370 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 MAGEF1Q9HAY2 307 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 NOX4Q9NPH5 578 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 PPANQ9NQ55 473 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 GKN1Q9NS71 199 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 LRWD1Q9UFC0 647 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 JRKLQ9Y4A0 524 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 CLCA3PQ9Y6N3 262 aa3.68□□□□□ -1.82
TRAPPC13-208ENST00000505553 IGLV5-39A0A0G2JS06 123 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 A0A0U1RQJ8 604 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 C2orf92A0A1B0GVN3 265 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 A0A1W2PPK0 400 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 LILRA5A6NI73 299 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM150CB9EJG8 249 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM178BH3BS89 294 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms