RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 SIGLEC11Q96RL6 698 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 GFM1Q96RP9 751 aaKnown RBP13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 BRINP2Q9C0B6 783 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 SMURF1Q9HCE7 757 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 KIF17Q9P2E2 1029 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 OGDHLQ9ULD0 1010 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 ZNF451Q9Y4E5 1061 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 ASB1Q9Y576 335 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 V9GYH0 126 aa13.83□□□□□ -0.19
COL6A4P2-202ENST00000504443 SEC22BO75396 215 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 OR4F21O95013 312 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 RAB25P57735 213 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 ERVK-8P63133 956 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 NFKB2Q00653 900 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 FLYWCH1Q4VC44 716 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 FAM160B1Q5W0V3 765 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 Q6ZSR9 355 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 GGHQ92820 318 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 OR5M11Q96RB7 305 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 FERD3LQ96RJ6 166 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 KRT84Q9NSB2 600 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 DCAF13Q9NV06 445 aaKnown RBP13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 NDFIP2Q9NV92 336 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 ZNF490Q9ULM2 529 aaPredicted RBP13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 SCML1Q9UN30 329 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 POLR3HQ9Y535 204 aaPredicted RBP13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 CLCA3PQ9Y6N3 262 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 SMIM30A4D0T7 59 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 NCAM2O15394 837 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 CSTF2P33240 577 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 TIE1P35590 1138 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 ETV6P41212 452 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 RPS5P46782 204 aaKnown RBP13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 HTR6P50406 440 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 TIAL1Q01085 375 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 KEAP1Q14145 624 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 PTGR1Q14914 329 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 SHQ1Q6PI26 577 aaKnown RBP13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 TMPRSS11AQ6ZMR5 421 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 ANKS3Q6ZW76 656 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 PLCZ1Q86YW0 608 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 CILP2Q8IUL8 1156 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 PHC2Q8IXK0 858 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 DPP10Q8N608 796 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 RNF121Q9H920 327 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 SLC25A37Q9NYZ2 338 aa13.83□□□□□ -0.2
COL6A4P2-202ENST00000504443 UBA6A0AVT1 1052 aaPredicted RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 BTN3A3O00478 584 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 C1QCP02747 245 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TNNI3P19429 210 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 RPS3P23396 243 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 ADRA1AP35348 466 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 RPS19P39019 145 aaKnown RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 BRCC3P46736 316 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 RPL34P49207 117 aaKnown RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 MXD1Q05195 221 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 MED22Q15528 200 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TSTQ16762 297 aaKnown RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TATDN3Q17R31 274 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 FAM171A1Q5VUB5 890 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 KDM4DQ6B0I6 523 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 ZNF549Q6P9A3 640 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 ZNF767PQ75MW2 155 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TSPYL5Q86VY4 417 aaPredicted RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 FBXO39Q8N4B4 442 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 IPCEF1Q8WWN9 437 aaPredicted RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 MRGPRX2Q96LB1 330 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 ZNF599Q96NL3 588 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 SLC22A4Q9H015 551 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 RAD18Q9NS91 495 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 SNTG1Q9NSN8 517 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TSR3Q9UJK0 312 aaKnown RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 AAR2Q9Y312 384 aaKnown RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 SLC9A3R1O14745 358 aaPredicted RBP13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 WDR47O94967 919 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 S1PR4O95977 384 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 B3GALT4O96024 378 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 PRSS56P0CW18 603 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TRAPPC2P0DI81 140 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TRAPPC2BP0DI82 140 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 ICAM3P32942 547 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 PROX2Q3B8N5 592 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 NADSYN1Q6IA69 706 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 MSRB3Q8IXL7 192 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 VWA5B2Q8N398 1253 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 SETD6Q8TBK2 473 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 REPS1Q96D71 796 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 CYP2S1Q96SQ9 504 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 TTLL2Q9BWV7 592 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 ZIM2Q9NZV7 527 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 OR12D3Q9UGF7 316 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 ALG5Q9Y673 324 aa13.82□□□□□ -0.2
COL6A4P2-202ENST00000504443 PARP14Q460N5 1801 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms