RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 SNX9Q9Y5X1 595 aa4.59□□□□□ -1.67
SCLT1-206ENST00000503565 CLTCQ00610 1675 aaKnown RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 EIF2AK4Q9P2K8 1649 aaKnown RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 NPATQ14207 1427 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 IGLV5-39A0A0G2JS06 123 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 TEX13DA0A0J9YY54 714 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 RPS10-NUDT3A0A1W2PQS6 291 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 ELOVL7A1L3X0 281 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 C5orf51A6NDU8 294 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 C5orf60A6NFR6 353 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 CTDSPLO15194 276 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PRPSAP2O60256 369 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 GPR137BO60478 399 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 RFPL2O75678 378 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 WDPCPO95876 746 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 GSRP00390 522 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PLGP00747 810 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 LDLRP01130 860 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 FGBP02675 491 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 CELA2AP08217 269 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 ANKRD34CP0C6C1 535 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SAGP10523 405 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 EPCAMP16422 314 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 MAPK3P27361 379 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 C21orf33P30042 268 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SLC6A6P31641 620 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SERPINB6P35237 376 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PLCD1P51178 756 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 CASP9P55211 416 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 IRX3P78415 501 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 MRPS21P82921 87 aaKnown RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 BNC1Q01954 994 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 EGR4Q05215 589 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 TRIP6Q15654 476 aaKnown RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PRTGQ2VWP7 1150 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 FUT11Q495W5 492 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PRAMEF8Q5VWM4 474 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SUSD4Q5VX71 490 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PRSS55Q6UWB4 352 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 ARHGAP22Q7Z5H3 698 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 C4orf19Q8IY42 314 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 C1orf87Q8N0U7 546 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 GBGT1Q8N5D6 347 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 NCOA7Q8NI08 942 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 LRRC8CQ8TDW0 803 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PPP4R1Q8TF05 950 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 FIG4Q92562 907 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PIGTQ969N2 578 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SGF29Q96ES7 293 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SLC25A33Q9BSK2 321 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 LSG1Q9H089 658 aaKnown RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SLCO1C1Q9NYB5 712 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 NINJ2Q9NZG7 142 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 B3GAT1Q9P2W7 334 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 LRWD1Q9UFC0 647 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PRDM4Q9UKN5 801 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 FBXW2Q9UKT8 454 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 HBS1LQ9Y450 684 aaKnown RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 YIPF1Q9Y548 306 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PCDHAC2Q9Y5I4 1007 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 INSL5Q9Y5Q6 135 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 PTGDR2Q9Y5Y4 395 aa4.58□□□□□ -1.68
SCLT1-206ENST00000503565 SPIN1Q9Y657 262 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-206ENST00000503565 C3P01024 1663 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 PLA2R1Q13018 1463 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 HFM1A2PYH4 1435 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 NUP155O75694 1391 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 PCDH11YQ9BZA8 1340 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 A0A0U1RQJ8 604 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 A0A1W2PPW3 197 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 MID1O15344 667 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 BMP10O95393 424 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 IGHV4-30-4P0DP06 118 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 HAPLN1P10915 354 aaPredicted RBP4.57□□□□□ -1.68
SCLT1-206ENST00000503565 ACP2P11117 423 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 MYOD1P15172 320 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 KELP23276 732 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 PSMC4P43686 418 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 RFX2P48378 723 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 LUMP51884 338 aaPredicted RBP4.57□□□□□ -1.68
SCLT1-206ENST00000503565 UCP2P55851 309 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 CLDN15P56746 228 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 VEZF1Q14119 521 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 NPTX1Q15818 432 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 KLC3Q6P597 504 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 BTNL8Q6UX41 500 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 TMPRSS12Q86WS5 348 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 AQP12AQ8IXF9 295 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 SRRM1Q8IYB3 904 aaKnown RBP4.57□□□□□ -1.68
SCLT1-206ENST00000503565 PGBD5Q8N414 524 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 MAGEC3Q8TD91 643 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 ABTB1Q969K4 478 aaPredicted RBP4.57□□□□□ -1.68
SCLT1-206ENST00000503565 DHX58Q96C10 678 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 PANX3Q96QZ0 392 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 GAL3ST4Q96RP7 486 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 C1orf21Q9H246 121 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 LRMDAQ9H2I8 198 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 RAB9BQ9NP90 201 aa4.57□□□□□ -1.68
SCLT1-206ENST00000503565 ACKR4Q9NPB9 350 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms