RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RPN2P04844 631 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 UMODP07911 640 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 ALAS2P22557 587 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 MAGEA6P43360 314 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 CDK16Q00536 496 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 FASTKQ14296 549 aaKnown RBP15.61■□□□□ 0.09
SCLT1-204ENST00000503215 GBX1Q14549 363 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 SF1Q15637 639 aaKnown RBP15.61■□□□□ 0.09
SCLT1-204ENST00000503215 ACSBG2Q5FVE4 666 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 MRPL14Q6P1L8 145 aaKnown RBP15.61■□□□□ 0.09
SCLT1-204ENST00000503215 MTERF4Q7Z6M4 381 aaKnown RBP15.61■□□□□ 0.09
SCLT1-204ENST00000503215 MRGPREQ86SM8 312 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 LRRC6Q86X45 466 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 PROKR1Q8TCW9 393 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 MAGOHBQ96A72 148 aaKnown RBP15.61■□□□□ 0.09
SCLT1-204ENST00000503215 SLC30A3Q99726 388 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 MFRPQ9BY79 579 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 IFT80Q9P2H3 777 aaPredicted RBP15.61■□□□□ 0.09
SCLT1-204ENST00000503215 NEU2Q9Y3R4 380 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 LRRK2Q5S007 2527 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 RP1L1Q8IWN7 2480 aaPredicted RBP15.6■□□□□ 0.09
SCLT1-204ENST00000503215 A0A1W2PPV9 198 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 KDM1AO60341 852 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 S1PR4O95977 384 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 PRR30Q53SZ7 412 aaPredicted RBP15.6■□□□□ 0.09
SCLT1-204ENST00000503215 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.6■□□□□ 0.09
SCLT1-204ENST00000503215 MRNIPQ6NTE8 343 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 NEPROQ6NW34 567 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 TTLL10Q6ZVT0 673 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 PPP1R32Q7Z5V6 425 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 SDCCAG8Q86SQ7 713 aaPredicted RBP15.6■□□□□ 0.09
SCLT1-204ENST00000503215 RASGEF1CQ8N431 466 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 COG1Q8WTW3 980 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 RAD51AP1Q96B01 352 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 MIPEPQ99797 713 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 NDC1Q9BTX1 674 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 DHRS4Q9BTZ2 278 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 HOMER3Q9NSC5 361 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 TXLNGQ9NUQ3 528 aa15.6■□□□□ 0.09
SCLT1-204ENST00000503215 STOX2Q9P2F5 926 aaPredicted RBP15.6■□□□□ 0.09
SCLT1-204ENST00000503215 GPN3Q9UHW5 284 aaPredicted RBP15.6■□□□□ 0.09
SCLT1-204ENST00000503215 ANKRD12Q6UB98 2062 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 LOC105369274A0A096LPK9 316 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 LOC102723532A0A0G2JNH3 316 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 CLEC18AA5D8T8 446 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 TTLL8A6PVC2 850 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 AP3B1O00203 1094 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 UQCRFS1P47985 274 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 CD97P48960 835 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 UBAP2LQ14157 1087 aaKnown RBP15.59■□□□□ 0.09
SCLT1-204ENST00000503215 SSPNQ14714 243 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 ANKRD20A4Q4UJ75 823 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 KIAA0930Q6ICG6 404 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-204ENST00000503215 CASC4Q6P4E1 433 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 CLEC18BQ6UXF7 455 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 MED25Q71SY5 747 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 COX15Q7KZN9 410 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 RAB43Q86YS6 212 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 CILP2Q8IUL8 1156 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 OR4N4Q8N0Y3 316 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 METTL27Q8N6F8 245 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-204ENST00000503215 RBMXL3Q8N7X1 1067 aaKnown RBP15.59■□□□□ 0.09
SCLT1-204ENST00000503215 TMEM102Q8N9M5 508 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-204ENST00000503215 CLEC18CQ8NCF0 446 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 OR2A1Q8NGT9 310 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 OR2Y1Q8NGV0 311 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 GSDMBQ8TAX9 411 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 SLC22A18Q96BI1 424 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 SYNPO2LQ9H987 977 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 SRPK3Q9UPE1 567 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 PADI2Q9Y2J8 665 aa15.59■□□□□ 0.09
SCLT1-204ENST00000503215 ARHGEF33A8MVX0 844 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 KPNA5O15131 536 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 MATN4O95460 622 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 CHRM3P20309 590 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 COILP38432 576 aaPredicted RBP15.58■□□□□ 0.08
SCLT1-204ENST00000503215 FOLR3P41439 243 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 OR1D4P47884 311 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 CTBP1Q13363 440 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 FRMPD2BQ6IN97 320 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 TTC23LQ6PF05 361 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 DENND6AQ8IWF6 608 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 REXO1L1PQ8IX06 675 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 Q8NA96 180 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 OR2L3Q8NG85 312 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 ZNF669Q96BR6 464 aaPredicted RBP15.58■□□□□ 0.08
SCLT1-204ENST00000503215 ZNF285Q96NJ3 590 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 TCF12Q99081 682 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 MESP1Q9BRJ9 268 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 ACAT2Q9BWD1 397 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 P4HTMQ9NXG6 502 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 NDOR1Q9UHB4 597 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 MED16Q9Y2X0 877 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 ZNF451Q9Y4E5 1061 aa15.58■□□□□ 0.08
SCLT1-204ENST00000503215 USP9XQ93008 2570 aaPredicted RBP15.57■□□□□ 0.08
SCLT1-204ENST00000503215 ZCWPW2A0A1B0GU75 182 aa15.57■□□□□ 0.08
SCLT1-204ENST00000503215 ALOX12BO75342 701 aa15.57■□□□□ 0.08
SCLT1-204ENST00000503215 SORBS2O94875 1100 aaKnown RBP15.57■□□□□ 0.08
SCLT1-204ENST00000503215 ESR1P03372 595 aa15.57■□□□□ 0.08
SCLT1-204ENST00000503215 PKMP14618 531 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms