RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 MBOAT1Q6ZNC8 495 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 RAB11FIP2Q7L804 512 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 CLEC14AQ86T13 490 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 ISCA2Q86U28 154 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 LMNTD1Q8N9Z9 388 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 KCTD4Q8WVF5 259 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 SMPDL3AQ92484 453 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 PTERQ96BW5 349 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 HIST1H2AHQ96KK5 128 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 PPM1MQ96MI6 270 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 HIST1H2AJQ99878 128 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 H2AFJQ9BTM1 129 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 NMRAL1Q9HBL8 299 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 SIDT1Q9NXL6 827 aaKnown RBP13.69□□□□□ -0.22
RNF4-202ENST00000502316 ARL15Q9NXU5 204 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 AKAP7Q9P0M2 348 aaPredicted RBP13.69□□□□□ -0.22
RNF4-202ENST00000502316 LOXL2Q9Y4K0 774 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
RNF4-202ENST00000502316 ADAMTS20P59510 1910 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 A0A0J9YY10 115 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 PABPN1LA6NDY0 278 aaKnown RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 A8MU76 341 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 ISM1B1AKI9 464 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 ERLIN1O75477 346 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 KLHL2O95198 593 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 ZBTB11O95625 1053 aaPredicted RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 COL6A2P12110 1019 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 CDH3P22223 829 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 OAS2P29728 719 aaKnown RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 CSTF2P33240 577 aaKnown RBP eCLIP13.68□□□□□ -0.22
RNF4-202ENST00000502316 FOXK2Q01167 660 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 ACAP2Q15057 778 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 TGFBIQ15582 683 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 OR4D1Q15615 310 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 ZXDCQ2QGD7 858 aaPredicted RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 CDKL4Q5MAI5 379 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 AGTRAPQ6RW13 159 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 SYTL1Q8IYJ3 562 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 RIBC1Q8N443 379 aaPredicted RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 C2orf73Q8N5S3 287 aaPredicted RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 BMPERQ8N8U9 685 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 OR2A1Q8NGT9 310 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 OR2W6PQ8NHA6 318 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 RHEBL1Q8TAI7 183 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 EPS8L3Q8TE67 593 aaKnown RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 HNRNPLLQ8WVV9 542 aaKnown RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 FBXL8Q96CD0 374 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 NXNL1Q96CM4 212 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 PRR11Q96HE9 360 aaPredicted RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 CABS1Q96KC9 395 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 GPR78Q96P69 363 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 TMEM109Q9BVC6 243 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 ROPN1BQ9BZX4 212 aaPredicted RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 UNKQ9C0B0 810 aaKnown RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 CHRNA10Q9GZZ6 450 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 VPS11Q9H270 941 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 ROPN1Q9HAT0 212 aaPredicted RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 UTP6Q9NYH9 597 aaKnown RBP13.68□□□□□ -0.22
RNF4-202ENST00000502316 SATB2Q9UPW6 733 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 BTRCQ9Y297 605 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 KLK4Q9Y5K2 254 aa13.68□□□□□ -0.22
RNF4-202ENST00000502316 DMXL2Q8TDJ6 3036 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 PMS2P1A4D2B8 440 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 B4E171 279 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 KERAO60938 352 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 DXOO77932 396 aaKnown RBP13.67□□□□□ -0.22
RNF4-202ENST00000502316 MSL3P1P0C860 447 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 FGF3P11487 239 aaPredicted RBP13.67□□□□□ -0.22
RNF4-202ENST00000502316 ST6GAL1P15907 406 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 TFEBP19484 476 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 TSPAN7P41732 249 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 MLLT3P42568 568 aaPredicted RBP13.67□□□□□ -0.22
RNF4-202ENST00000502316 SLCO1A2P46721 670 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 HNMTP50135 292 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 TBPL1P62380 186 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 HSD11B2P80365 405 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 C3orf38Q5JPI3 329 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 SUSD1Q6UWL2 747 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 FRA10AC1Q70Z53 315 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 TRIM73Q86UV7 250 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 LCA5Q86VQ0 697 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 PLD6Q8N2A8 252 aaKnown RBP13.67□□□□□ -0.22
RNF4-202ENST00000502316 D2HGDHQ8N465 521 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 FBXO39Q8N4B4 442 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 PPFIBP2Q8ND30 876 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 MYRIPQ8NFW9 859 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 OR2L3Q8NG85 312 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 OR56A3Q8NH54 315 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 STAG3L4Q8TBR4 150 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 ACMSDQ8TDX5 336 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 GATA6Q92908 595 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 NXPE2Q96DL1 559 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 TRAPPC9Q96Q05 1148 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 ATOH8Q96SQ7 321 aa13.67□□□□□ -0.22
RNF4-202ENST00000502316 SGPP1Q9BX95 441 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms