RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CHRNA10Q9GZZ6 450 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 LHX9Q9NQ69 397 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 CTAGE15A4D2H0 777 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 KRT87PA6NCN2 255 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 ZNF839A8K0R7 811 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 MYO1CO00159 1063 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 CTAGE8P0CG41 777 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 WT1P19544 449 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 TCN2P20062 427 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 CYP2A7P20853 494 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 MAGP20916 626 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 SAT1P21673 171 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 DLSTP36957 453 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 STAT5AP42229 794 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 MAGEA4P43358 317 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 ITGA1P56199 1179 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 IL2P60568 153 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 TIAL1Q01085 375 aaKnown RBP eCLIP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 GUCY2DQ02846 1103 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 TSTA3Q13630 321 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 FASTKQ14296 549 aaKnown RBP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 ZIC1Q15915 447 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 PRAMEF17Q5VTA0 474 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 KIAA1614Q5VZ46 1190 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 FIGLAQ6QHK4 219 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 ZDHHC24Q6UX98 284 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 CYS1Q717R9 158 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 PIWIL4Q7Z3Z4 852 aaKnown RBP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 CTAGE6Q86UF2 777 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 CTAGE4Q8IX94 777 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 MYO1HQ8N1T3 1032 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 DNAJC22Q8N4W6 341 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 FBXO15Q8NCQ5 510 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 MCOLN3Q8TDD5 553 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 DENND1AQ8TEH3 1009 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 SMPDL3AQ92484 453 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 CLIP3Q96DZ5 547 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 UBL7Q96S82 380 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-213ENST00000498495 PHACTR1Q9C0D0 580 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 IRAK4Q9NWZ3 460 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 TXNDC16Q9P2K2 825 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 KCND3Q9UK17 655 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 PLCL2Q9UPR0 1127 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 KLHL20Q9Y2M5 609 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 PCDHGA4Q9Y5G9 962 aa12.33□□□□□ -0.44
HSPG2-213ENST00000498495 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 ESYT3A0FGR9 886 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 ZNF891A8MT65 544 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 TARM1B6A8C7 271 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 SLC16A5O15375 505 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 KATNA1O75449 491 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 OR2B3O76000 313 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 C8GP07360 202 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 HBQ1P09105 142 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 GSTA2P09210 222 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 HIST1H2AGP0C0S8 130 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 HIST1H2ADP20671 130 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 FDXRP22570 491 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 CMPK1P30085 196 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 RPA3P35244 121 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 GRIA3P42263 894 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 PNLIPRP1P54315 467 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 ILF2Q12905 390 aaKnown RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 DEFB110Q30KQ9 67 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 TAF1BQ53T94 588 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 ZC3H12BQ5HYM0 836 aaKnown RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 FAM199XQ6PEV8 388 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 SUSD1Q6UWL2 747 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 SYTL1Q8IYJ3 562 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 OR2A1Q8NGT9 310 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 MR1Q95460 341 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 LINGO1Q96FE5 620 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 SLC45A3Q96JT2 553 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 HIST1H2AHQ96KK5 128 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 MIPEPQ99797 713 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 HIST1H2AJQ99878 128 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 H2AFJQ9BTM1 129 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 SLC12A9Q9BXP2 914 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 SPRTNQ9H040 489 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 ACTR5Q9H9F9 607 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 AKIRIN1Q9H9L7 192 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-213ENST00000498495 IL17BQ9UHF5 180 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 CROTQ9UKG9 612 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 PSAT1Q9Y617 370 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 AP1M2Q9Y6Q5 423 aa12.32□□□□□ -0.44
HSPG2-213ENST00000498495 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 A0A1W2PPV9 198 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 PABPN1LA6NDY0 278 aaKnown RBP12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ERVH48-1M5A8F1 160 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 MEN1O00255 615 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 NKX2-8O15522 239 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ZNF749O43361 778 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 HCRTR1O43613 425 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 PIAS1O75925 651 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 SLC16A8O95907 504 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ERGP11308 486 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms