RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ZNF583Q96ND8 569 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 CDK15Q96Q40 435 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 EGFL8Q99944 293 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ASB8Q9H765 288 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 WWOXQ9NZC7 414 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 POLR3HQ9Y535 204 aaPredicted RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 BRWD1Q9NSI6 2320 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ELOVL7A1L3X0 281 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 SLC25A14O95258 325 aaPredicted RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 SNAP29O95721 258 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 TRBC1P01850 177 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 MAPK1P28482 360 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 SPAM1P38567 509 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 HTR6P50406 440 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 GABARAPL2P60520 117 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 RPL38P63173 70 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 CYP4F3Q08477 520 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 IMPG1Q17R60 797 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 PLA2G4EQ3MJ16 856 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 LEXMQ3ZCV2 418 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 BROXQ5VW32 411 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 LINGO4Q6UY18 593 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 MSANTD1Q6ZTZ1 278 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 MTSS1LQ765P7 747 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 THAP5Q7Z6K1 395 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ADHFE1Q8IWW8 467 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ETFBKMTQ8IXQ9 262 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 C8orf59Q8N0T1 100 aaPredicted RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 CLEC4FQ8N1N0 589 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 NAT16Q8N8M0 369 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ZNF548Q8NEK5 533 aaPredicted RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 GTF2H4Q92759 462 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 HDAC2Q92769 488 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 USP7Q93009 1102 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 RHBDF1Q96CC6 855 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 CHFRQ96EP1 664 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 LYSMD1Q96S90 227 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 RBM4BQ9BQ04 359 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 RBM4Q9BWF3 364 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 CLMPQ9H6B4 373 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 RMND5AQ9H871 391 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 POLR1BQ9H9Y6 1135 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 NTN4Q9HB63 628 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 LRTM1Q9HBL6 345 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 ABCB8Q9NUT2 735 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 THG1LQ9NWX6 298 aaKnown RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 C1orf109Q9NX04 203 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 KCTD5Q9NXV2 234 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 VPS51Q9UID3 782 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 FBXO10Q9UK96 956 aa12.13□□□□□ -0.47
AFF3-215ENST00000498090 FAF1Q9UNN5 650 aaPredicted RBP12.13□□□□□ -0.47
AFF3-215ENST00000498090 GLYATL1P3A0A0U1RQE8 302 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 IQCF5A8MTL0 148 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 FAM220BPB1ANY3 271 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 NPIPB8E9PQR5 432 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 G3V2T6 193 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 UPK1AO00322 258 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 TAPBPO15533 448 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 SEC24DO94855 1032 aaPredicted RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 ADH1CP00326 375 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 PGRP06401 933 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 ANXA5P08758 320 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 PRPS2P11908 318 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 NFKBIAP25963 317 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 GDI1P31150 447 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 NSG1P42857 185 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 HSPA7P48741 367 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 EMP3P54852 163 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 MTPNP58546 118 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 ZNF33BQ06732 778 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 MESP2Q0VG99 397 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 IL18R1Q13478 541 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 RAB39AQ14964 217 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 SMAD2Q15796 467 aaKnown RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 PLEKHG6Q3KR16 790 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 GGTA1PQ4G0N0 100 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 RUNDC3AQ59EK9 446 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 KCTD8Q6ZWB6 473 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 YAF2Q8IY57 180 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 ZNF555Q8NEP9 628 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 PJA1Q8NG27 643 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 TMBIM1Q969X1 311 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 ULK4Q96C45 1275 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 EID2BQ96D98 161 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 THUMPD3Q9BV44 507 aaKnown RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 PHF7Q9BWX1 381 aaPredicted RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 TRIM8Q9BZR9 551 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 ING2Q9H160 280 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 IFT80Q9P2H3 777 aaPredicted RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 CRLS1Q9UJA2 301 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 FNDC3AQ9Y2H6 1198 aaKnown RBP12.12□□□□□ -0.47
AFF3-215ENST00000498090 TMED5Q9Y3A6 229 aa12.12□□□□□ -0.47
AFF3-215ENST00000498090 C1orf232A0A0U1RR37 186 aa12.11□□□□□ -0.47
AFF3-215ENST00000498090 SERTM1A2A2V5 107 aa12.11□□□□□ -0.47
AFF3-215ENST00000498090 AGAP14A8MT82 685 aa12.11□□□□□ -0.47
AFF3-215ENST00000498090 MANBAO00462 879 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms