RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZNF185O15231 689 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 HCRTR1O43613 425 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 CAPN1P07384 714 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 CD63P08962 238 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 ERGP11308 486 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 PGAM1P18669 254 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 CHRM3P20309 590 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 CASRP41180 1078 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 SLC1A2P43004 574 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 PTK6Q13882 451 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 ZC3H12BQ5HYM0 836 aaKnown RBP15.12■□□□□ 0.01
HDAC4-213ENST00000496347 LCN10Q6JVE6 187 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 NEK10Q6ZWH5 1172 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 LMNTD1Q8N9Z9 388 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 GBP5Q96PP8 586 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 NDC1Q9BTX1 674 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 ZNF71Q9NQZ8 489 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-213ENST00000496347 TXLNGQ9NUQ3 528 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 TRMT1Q9NXH9 659 aaKnown RBP15.12■□□□□ 0.01
HDAC4-213ENST00000496347 EURLQ9NYK6 297 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 IL1RAPL1Q9NZN1 696 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-213ENST00000496347 ASIC3Q9UHC3 531 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 CIDEBQ9UHD4 219 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 TP53TG5Q9Y2B4 290 aa15.12■□□□□ 0.01
HDAC4-213ENST00000496347 TARM1B6A8C7 271 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 MYO1CO00159 1063 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 PSIP1O75475 530 aaKnown RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 TTC4O95801 387 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 CATP04040 527 aaKnown RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 ENO3P13929 434 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 GCGRP47871 477 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 CSRP3P50461 194 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 CLCN7P51798 805 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 ARHGAP19Q14CB8 494 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 SF1Q15637 639 aaKnown RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 CYP2A13Q16696 494 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 YOD1Q5VVQ6 348 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 CPZQ66K79 652 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 PCGF5Q86SE9 256 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 RAB43Q86YS6 212 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 AGGF1Q8N302 714 aaeCLIP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 ZNF655Q8N720 491 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 GABPB2Q8TAK5 448 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 FAM136AQ96C01 138 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 PDLIM2Q96JY6 352 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 RUNDC3BQ96NL0 473 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 NAT9Q9BTE0 207 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 DDX47Q9H0S4 455 aaKnown RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 C20orf96Q9NUD7 363 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-213ENST00000496347 TLK1Q9UKI8 766 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 FAM169AQ9Y6X4 670 aa15.11■□□□□ 0.01
HDAC4-213ENST00000496347 A0A1B0GX78 115 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ZNF839A8K0R7 811 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ARHGEF33A8MVX0 844 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 DNALI1O14645 258 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 PRICKLE3O43900 615 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 WISP1O95388 367 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 HSD17B2P37059 387 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 PTGIRP43119 386 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ARSFP54793 590 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 DCDP81605 110 aaKnown RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 TLE1Q04724 770 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 KLRB1Q12918 225 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 CRYMQ14894 314 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 CCSMST1Q4G0I0 132 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ACSBG2Q5FVE4 666 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 SYDE1Q6ZW31 735 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 PTRH1Q86Y79 214 aaKnown RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 DENND6AQ8IWF6 608 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 FAM20CQ8IXL6 584 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 C2orf73Q8N5S3 287 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 OR2L3Q8NG85 312 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 GIMAP7Q8NHV1 300 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ZUFSPQ96AP4 578 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 FKBP10Q96AY3 582 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 SIGLEC10Q96LC7 697 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ZNF285Q96NJ3 590 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 IP6K3Q96PC2 410 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 SELENOSQ9BQE4 189 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 TRIM4Q9C037 500 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 SPRTNQ9H040 489 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ING2Q9H160 280 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 EPN3Q9H201 632 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 CLMPQ9H6B4 373 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 ACSS2Q9NR19 701 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 NDOR1Q9UHB4 597 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 GPN3Q9UHW5 284 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 PCDHGA9Q9Y5G4 932 aaKnown RBP15.1■□□□□ 0.01
HDAC4-213ENST00000496347 CCDC88CQ9P219 2028 aa15.1■□□□□ 0.01
HDAC4-213ENST00000496347 HECTD1Q9ULT8 2610 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 USP27XA6NNY8 438 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 EIF3FO00303 357 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 KLF7O75840 302 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 DNAJB5O75953 348 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 CBSLP0DN79 551 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms