RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CCSMST1Q4G0I0 132 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 TLDC1Q6P9B6 456 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 GALNT7Q86SF2 657 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 IGDCC3Q8IVU1 814 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 PALM2Q8IXS6 379 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 DSELQ8IZU8 1212 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 LMNTD1Q8N9Z9 388 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 DENND1AQ8TEH3 1009 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 ZUFSPQ96AP4 578 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 ERP44Q9BS26 406 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 CORO1CQ9ULV4 474 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-211ENST00000494800 SRPK3Q9UPE1 567 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 UTP11Q9Y3A2 253 aaKnown RBP16.99■□□□□ 0.31
HDAC4-211ENST00000494800 MRPS18BQ9Y676 258 aaKnown RBP16.99■□□□□ 0.31
HDAC4-211ENST00000494800 TEX264Q9Y6I9 313 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 MGAQ8IWI9 3026 aa16.99■□□□□ 0.31
HDAC4-211ENST00000494800 ARHGEF33A8MVX0 844 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 TARM1B6A8C7 271 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 C9J4A7 227 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 MYO1CO00159 1063 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 TERTO14746 1132 aaKnown RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 ZSCAN9O15535 394 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 F7P08709 466 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 F8A1P23610 371 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 PTPN4P29074 926 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 RPA3P35244 121 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 RPL21P46778 160 aaKnown RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 CKAP4Q07065 602 aaKnown RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 ERV3-1Q14264 604 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 FRG1Q14331 258 aaKnown RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 ZIC1Q15915 447 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 CYP2A13Q16696 494 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 LINC00303Q3SY05 128 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 FAM199XQ6PEV8 388 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 ANKMY2Q8IV38 441 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 SYTL1Q8IYJ3 562 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 DNAJC22Q8N4W6 341 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 SLC38A9Q8NBW4 561 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 FBXO15Q8NCQ5 510 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 GIMAP7Q8NHV1 300 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 CD200R1Q8TD46 325 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 APOBEC4Q8WW27 367 aaKnown RBP16.98■□□□□ 0.31
HDAC4-211ENST00000494800 SMPDL3AQ92484 453 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 PWWP2AQ96N64 755 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 NDNQ99608 321 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 NDC1Q9BTX1 674 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 RAB17Q9H0T7 212 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 ADNPQ9H2P0 1102 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 ACTL8Q9H568 366 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 TXLNGQ9NUQ3 528 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 PCMTD2Q9NV79 361 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 WHRNQ9P202 907 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 ZFATQ9P243 1243 aa16.98■□□□□ 0.31
HDAC4-211ENST00000494800 PABPN1LA6NDY0 278 aaKnown RBP16.97■□□□□ 0.31
HDAC4-211ENST00000494800 CCNDBP1O95273 360 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 SYF2O95926 243 aaKnown RBP16.97■□□□□ 0.31
HDAC4-211ENST00000494800 AHSGP02765 367 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 PRB1P04280 392 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 RAB40ALP0C0E4 278 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 FAM87AP0C7U9 286 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 CMPK1P30085 196 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 RORAP35398 523 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 C2orf54Q08AI8 447 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 DEFB109BQ30KR1 87 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.97■□□□□ 0.31
HDAC4-211ENST00000494800 TCTE1Q5JU00 501 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 PRAMEF17Q5VTA0 474 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 STEAP4Q687X5 459 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 FIGLAQ6QHK4 219 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 ZNF517Q6ZMY9 492 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-211ENST00000494800 SYVN1Q86TM6 617 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 FAM20CQ8IXL6 584 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 CPNE9Q8IYJ1 553 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 ZBED8Q8IZ13 594 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 MYO1HQ8N1T3 1032 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 FBXO36Q8NEA4 188 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 PROKR1Q8TCW9 393 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 ASB11Q8WXH4 323 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 DLG3Q92796 817 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 SLC30A3Q99726 388 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 CHST8Q9H2A9 424 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 DPH5Q9H2P9 285 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 NSMCE4AQ9NXX6 385 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 UTP6Q9NYH9 597 aaKnown RBP16.97■□□□□ 0.31
HDAC4-211ENST00000494800 EURLQ9NYK6 297 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 POLHQ9Y253 713 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 FARSAQ9Y285 508 aaKnown RBP16.97■□□□□ 0.31
HDAC4-211ENST00000494800 PADI2Q9Y2J8 665 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 MED16Q9Y2X0 877 aa16.97■□□□□ 0.31
HDAC4-211ENST00000494800 CDC14CA4D256 554 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 RAD51CO43502 376 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 CD63P08962 238 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 ERGP11308 486 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 MCM3P25205 808 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 PNLIPRP1P54315 467 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 ARSFP54793 590 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 POLE2P56282 527 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 CAV1Q03135 178 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 MGAT5Q09328 741 aa16.96■□□□□ 0.31
HDAC4-211ENST00000494800 ILF2Q12905 390 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms