RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 SDC1P18827 310 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 PRKACGP22612 351 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 WEE1P30291 646 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 SLC6A12P48065 614 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CHIT1Q13231 466 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CDKL4Q5MAI5 379 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 GPR107Q5VW38 600 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 OTOP2Q7RTS6 562 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 TMEM132CQ8N3T6 1108 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CYB5D2Q8WUJ1 264 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 ITCHQ96J02 903 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 EMILIN2Q9BXX0 1053 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 TOR3AQ9H497 397 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 MTG2Q9H4K7 406 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 RMND5AQ9H871 391 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 SERHLQ9NQF3 203 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 DOCK6Q96HP0 2047 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 TRBV5-3A0A0A0MS03 114 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 C16orf96A6NNT2 1141 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 ARHGEF15O94989 841 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 PPM1AP35813 382 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 ETV3P41162 512 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 HNMTP50135 292 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 HTRA3P83110 453 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 VAC14Q08AM6 782 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 TEAD2Q15562 447 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 ZDHHC20Q5W0Z9 365 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 ATG9BQ674R7 924 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 OR4F3Q6IEY1 312 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 SPESP1Q6UW49 350 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 C12orf43Q96C57 262 aaKnown RBP10.9□□□□□ -0.66
CHMP3-209ENST00000494623 CMTM7Q96FZ5 175 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 DCUN1D5Q9BTE7 237 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 ADNPQ9H2P0 1102 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 DCAF13Q9NV06 445 aaKnown RBP10.9□□□□□ -0.66
CHMP3-209ENST00000494623 DNAJC11Q9NVH1 559 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 U3KQV3 271 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 OBSL1O75147 1896 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 A0A096LPI6 279 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 GFYI3L273 518 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 EIF3FO00303 357 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-209ENST00000494623 C1QCP02747 245 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 MPC1LP0DKB6 136 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 TYRP14679 529 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 TPD52P55327 224 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-209ENST00000494623 CREMQ03060 361 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 DDX39BQ13838 428 aaKnown RBP10.9□□□□□ -0.66
CHMP3-209ENST00000494623 SPIDRQ14159 915 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 RAB39AQ14964 217 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 SF1Q15637 639 aaKnown RBP10.9□□□□□ -0.66
CHMP3-209ENST00000494623 PLEKHS1Q5SXH7 462 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 FRG2Q64ET8 278 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 TTC23LQ6PF05 361 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 DOK6Q6PKX4 331 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 CYP2U1Q7Z449 544 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 GPR180Q86V85 440 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 L3MBTL4Q8NA19 623 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 KLHL23Q8NBE8 558 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 CDC26Q8NHZ8 85 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 FOXJ1Q92949 421 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 IRF7Q92985 503 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 FRG2BQ96QU4 278 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 CPPED1Q9BRF8 314 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-209ENST00000494623 OSBPL6Q9BZF3 934 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 CEP44Q9C0F1 390 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 TIMMDC1Q9NPL8 285 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 ATXN10Q9UBB4 475 aa10.9□□□□□ -0.66
CHMP3-209ENST00000494623 A0A1W2PQ67 120 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 TMEM202A6NGA9 273 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 TTC34A8MYJ7 566 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 CFAP99D6REC4 459 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 RFXANKO14593 260 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 SH3BGRLO75368 114 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 E2F6O75461 281 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 LEFTY1O75610 366 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 RFPL2O75678 378 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 ADH1AP07327 375 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 CLTBP09497 229 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 AMD1P17707 334 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 POLR2IP36954 125 aaKnown RBP10.89□□□□□ -0.67
CHMP3-209ENST00000494623 PFN3P60673 137 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 IRF8Q02556 426 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 GBX1Q14549 363 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 TMEM215Q68D42 235 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 NOXRED1Q6NXP6 359 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 TMEM179BQ7Z7N9 219 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 GPR149Q86SP6 731 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 ADIPOR2Q86V24 386 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 DTNBP1Q96EV8 351 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 RIOK2Q9BVS4 552 aaKnown RBP10.89□□□□□ -0.67
CHMP3-209ENST00000494623 YTHDF1Q9BYJ9 559 aaKnown RBP10.89□□□□□ -0.67
CHMP3-209ENST00000494623 FAM118AQ9NWS6 357 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 FAM220BPB1ANY3 271 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 CYP2A6P11509 494 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-209ENST00000494623 MAP4P27816 1152 aaKnown RBP10.89□□□□□ -0.67
CHMP3-209ENST00000494623 MAPK1P28482 360 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 HLCSP50747 726 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 GZMMP51124 257 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 GGTA1PQ4G0N0 100 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms