RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MTBPQ96DY7 904 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 TCF12Q99081 682 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 CHST8Q9H2A9 424 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 ACSS2Q9NR19 701 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 CATSPERZQ9NTU4 200 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 ZNF446Q9NWS9 450 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 RARRES3Q9UL19 164 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 FARSAQ9Y285 508 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 PIKFYVEQ9Y2I7 2098 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 CROCCQ5TZA2 2017 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 CCDC88CQ9P219 2028 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 C21orf140B9A014 251 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 POC1B-GALNT4F8VUJ3 575 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 TOX3O15405 576 aaPredicted RBP11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 BPIP17213 487 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 TTPAP49638 278 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 FOXL2P58012 376 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 CACNG1Q06432 222 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 GPR33Q49SQ1 333 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 FASTKD1Q53R41 847 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 AGBL2Q5U5Z8 902 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 SLC6A19Q695T7 634 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 ZNF470Q6ECI4 717 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 NEPROQ6NW34 567 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 ABRAXAS1Q6UWZ7 409 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 MAMDC2Q7Z304 686 aaPredicted RBP11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 LRRTM4Q86VH4 590 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 PPM1NQ8N819 430 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 OR4L1Q8NH43 312 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 UHMK1Q8TAS1 419 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 ADAMTS17Q8TE56 1095 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 SLC44A1Q8WWI5 657 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 HDAC10Q969S8 669 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 PGM2Q96G03 612 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 ZDHHC12Q96GR4 267 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 CDKN2AIPNLQ96HQ2 116 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 SLC41A2Q96JW4 573 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 PDE7BQ9NP56 450 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 FGF21Q9NSA1 209 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 INTS10Q9NVR2 710 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 LGALS13Q9UHV8 139 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 SRPK3Q9UPE1 567 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 NFS1Q9Y697 457 aa11.4□□□□□ -0.58
CSNK1E-212ENST00000494610 GLYATL1P3A0A0U1RQE8 302 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 CCDC78A2IDD5 438 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ENO4A6NNW6 628 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 KMOO15229 486 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SCRG1O75711 98 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 CDK14O94921 469 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 PRAMEF1O95521 474 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 GOT2P00505 430 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 LDLRP01130 860 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SHBGP04278 402 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ERVK-10P10266 1014 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 POU3F2P20265 443 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 MC4RP32245 332 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SPRP35270 261 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 CTSCP53634 463 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ABRQ12979 859 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 PLEKHN1Q494U1 663 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ATP13A5Q4VNC0 1218 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 HSP90AA5PQ58FG0 334 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 GRTP1Q5TC63 336 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 TRMT10BQ6PF06 316 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ADGRD1Q6QNK2 874 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 CES3Q6UWW8 571 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 MICALCLQ6ZW33 695 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SYVN1Q86TM6 617 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 TRAPPC5Q8IUR0 188 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 CISD2Q8N5K1 135 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 TRAM1L1Q8N609 369 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ENDOVQ8N8Q3 282 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 OR13C4Q8NGS5 318 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 EPS8L3Q8TE67 593 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 HEXDCQ8WVB3 486 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SNRNP40Q96DI7 357 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ZNF514Q96K75 400 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SH3GL2Q99962 352 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 DHRS4Q9BTZ2 278 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ZSCAN5AQ9BUG6 496 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SLAMF7Q9NQ25 335 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 IARS2Q9NSE4 1012 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 POT1Q9NUX5 634 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ASF1BQ9NVP2 202 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 SLC2A6Q9UGQ3 507 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 FBXO5Q9UKT4 447 aa11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 PCDHGA9Q9Y5G4 932 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-212ENST00000494610 ZFHX3Q15911 3703 aa11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 DIDO1Q9BTC0 2240 aaKnown RBP11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 TLDC2A0PJX2 215 aa11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 WIPF3A6NGB9 483 aa11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 BUD23O43709 281 aaKnown RBP11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 UGT1A9O60656 530 aa11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 CEACAM4O75871 244 aa11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 SASH3O75995 380 aa11.38□□□□□ -0.59
CSNK1E-212ENST00000494610 MT-ND3P03897 115 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms