RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RUNDC3BQ96NL0 473 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 ZNF71Q9NQZ8 489 aaPredicted RBP31.95■■■□□ 2.71
CBX4-203ENST00000494546 SNX7Q9UNH6 387 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 IVDP26440 423 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 PSMB5P28074 263 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 BBS9Q3SYG4 887 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 MSS51Q4VC12 460 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 FAM69BQ5VUD6 431 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 FIGLAQ6QHK4 219 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 SYDE1Q6ZW31 735 aaPredicted RBP31.94■■■□□ 2.7
CBX4-203ENST00000494546 PTRH1Q86Y79 214 aaKnown RBP31.94■■■□□ 2.7
CBX4-203ENST00000494546 GIMAP7Q8NHV1 300 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 ABHD17AQ96GS6 310 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 EBNA1BP2Q99848 306 aaKnown RBP31.94■■■□□ 2.7
CBX4-203ENST00000494546 DPH2Q9BQC3 489 aaPredicted RBP31.94■■■□□ 2.7
CBX4-203ENST00000494546 EURLQ9NYK6 297 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 SPATA7Q9P0W8 599 aa31.94■■■□□ 2.7
CBX4-203ENST00000494546 C9J4A7 227 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 PRICKLE3O43900 615 aaPredicted RBP31.93■■■□□ 2.7
CBX4-203ENST00000494546 HAUS5O94927 633 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 CAPN1P07384 714 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 GRIA3P42263 894 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 PAFAH1B1P43034 410 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 CUL1Q13616 776 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 EEF1AKMT2Q5JPI9 291 aaKnown RBP31.93■■■□□ 2.7
CBX4-203ENST00000494546 FCRL6Q6DN72 434 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 TLDC1Q6P9B6 456 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 MCATQ8IVS2 390 aaKnown RBP31.93■■■□□ 2.7
CBX4-203ENST00000494546 SPNS2Q8IVW8 549 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 HMGCLL1Q8TB92 370 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 KCNJ9Q92806 393 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 DHCR7Q9UBM7 475 aaKnown RBP31.93■■■□□ 2.7
CBX4-203ENST00000494546 TCFL5Q9UL49 500 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 MED16Q9Y2X0 877 aa31.93■■■□□ 2.7
CBX4-203ENST00000494546 SNRNP200O75643 2136 aaKnown RBP31.93■■■□□ 2.7
CBX4-203ENST00000494546 ARHGEF33A8MVX0 844 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 J3QKU1 62 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 CBSLP0DN79 551 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 ERVK-10P10266 1014 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 CBSP35520 551 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 ZNF385CQ66K41 422 aaPredicted RBP31.92■■■□□ 2.7
CBX4-203ENST00000494546 RHBDD2Q6NTF9 364 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 OR9A1PQ8NGU1 263 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 THAP4Q8WY91 577 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 GPR21Q99679 349 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 MIPEPQ99797 713 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 TRIM51Q9BSJ1 452 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 SRPK3Q9UPE1 567 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 COMMD10Q9Y6G5 202 aa31.92■■■□□ 2.7
CBX4-203ENST00000494546 PSIP1O75475 530 aaKnown RBP31.91■■■□□ 2.7
CBX4-203ENST00000494546 FKBP9O95302 570 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 TTC4O95801 387 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 CATP04040 527 aaKnown RBP31.91■■■□□ 2.7
CBX4-203ENST00000494546 PMS2P54278 862 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 FASTKQ14296 549 aaKnown RBP31.91■■■□□ 2.7
CBX4-203ENST00000494546 NCF4Q15080 339 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 NDC1Q9BTX1 674 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 FAM114A2Q9NRY5 505 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 TXLNGQ9NUQ3 528 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 KLHL42Q9P2K6 505 aa31.91■■■□□ 2.7
CBX4-203ENST00000494546 BOD1L1Q8NFC6 3051 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 RFPL1O75677 317 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 MORF4L2Q15014 288 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 CYP2A13Q16696 494 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 ZC3H12BQ5HYM0 836 aaKnown RBP31.9■■■□□ 2.7
CBX4-203ENST00000494546 SPANXN3Q5MJ09 141 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 NEK10Q6ZWH5 1172 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 IGDCC3Q8IVU1 814 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 PROKR1Q8TCW9 393 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 INPP5DQ92835 1189 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 PWWP2AQ96N64 755 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 NAT9Q9BTE0 207 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 DHRS7Q9Y394 339 aa31.9■■■□□ 2.7
CBX4-203ENST00000494546 CCDC188H7C350 402 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 TTI1O43156 1089 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 HP1BP3Q5SSJ5 553 aaPredicted RBP31.89■■■□□ 2.7
CBX4-203ENST00000494546 MLIPQ5VWP3 458 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 PDIK1LQ8N165 341 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 C2CD4AQ8NCU7 369 aaPredicted RBP31.89■■■□□ 2.7
CBX4-203ENST00000494546 OR2L3Q8NG85 312 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 OR2A1Q8NGT9 310 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 GABPB2Q8TAK5 448 aaPredicted RBP31.89■■■□□ 2.7
CBX4-203ENST00000494546 ZUFSPQ96AP4 578 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 GBP5Q96PP8 586 aa31.89■■■□□ 2.7
CBX4-203ENST00000494546 AARSD1Q9BTE6 412 aaKnown RBP31.89■■■□□ 2.7
CBX4-203ENST00000494546 GPN3Q9UHW5 284 aaPredicted RBP31.89■■■□□ 2.7
CBX4-203ENST00000494546 A0A1W2PPV9 198 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 MKRN2OSH3BPM6 223 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 PYCARD-AS1I3L0S3 204 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 MYO1CO00159 1063 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 FANCGO15287 622 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 SUV39H1O43463 412 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 VPS26AO75436 327 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 DNAJB5O75953 348 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 DCDP81605 110 aaKnown RBP31.88■■■□□ 2.69
CBX4-203ENST00000494546 TSTA3Q13630 321 aaPredicted RBP31.88■■■□□ 2.69
CBX4-203ENST00000494546 LACTB2Q53H82 288 aaPredicted RBP31.88■■■□□ 2.69
CBX4-203ENST00000494546 CD200R1Q8TD46 325 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 CFAP36Q96G28 342 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 PKP4Q99569 1192 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms