RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 KBTBD3Q8NAB2 608 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 EXD1Q8NHP7 514 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 CTCFLQ8NI51 663 aaPredicted RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 TBC1D16Q8TBP0 767 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 CCDC107Q8WV48 283 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 KRT35Q92764 455 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 DNASE1L2Q92874 299 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ATP6V0A1Q93050 837 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 EXT2Q93063 718 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 TEKT1Q969V4 418 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SPSB1Q96BD6 273 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 AK8Q96MA6 479 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SLC22A12Q96S37 553 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 INTS14Q96SY0 518 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 INPP5KQ9BT40 448 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 RBM4Q9BWF3 364 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 XPO4Q9C0E2 1151 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 RAB6CQ9H0N0 254 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SEMA6AQ9H2E6 1030 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 GOLPH3LQ9H4A5 285 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 TUFT1Q9NNX1 390 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 FLRT3Q9NZU0 649 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 MOSPD1Q9UJG1 213 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SLC7A7Q9UM01 511 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SNX7Q9UNH6 387 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 C2CD2Q9Y426 696 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ELOVL7A1L3X0 281 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 OR2M5A3KFT3 312 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CTAGE9A4FU28 777 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 C5orf52A6NGY3 159 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PMS2P5A8MQ11 134 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SMIM1B2RUZ4 78 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PGRMC2O15173 223 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CTSVO60911 334 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 KERAO60938 352 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 GCNT3O95395 438 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 LIPFP07098 398 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 VIMP08670 466 aaKnown RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 OR52Z1P0C646 297 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 FAM58BPP0C7Q3 252 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CTAGE8P0CG41 777 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 TRIM49P0CI25 452 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 TRIM49CP0CI26 452 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PDGFRAP16234 1089 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ITGA3P26006 1051 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 MARK3P27448 753 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 TIA1P31483 386 aaKnown RBP eCLIP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SLC6A6P31641 620 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 MTHFRP42898 656 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PSMC4P43686 418 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ASCL1P50553 236 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 STARD6P59095 220 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 RPL24P83731 157 aaKnown RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CDK3Q00526 305 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PRKCZQ05513 592 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 C17orf67Q0P5P2 114 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 TEFQ10587 303 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 RPA4Q13156 261 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 MELKQ14680 651 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 LASP1Q14847 261 aaKnown RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 UGCGQ16739 394 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF876PQ49A33 203 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 C6orf163Q5TEZ5 329 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SHEQ5VZ18 495 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 RAB12Q6IQ22 244 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 NOTUMQ6P988 496 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 TRIM65Q6PJ69 517 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PLXDC2Q6UX71 529 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 GBP6Q6ZN66 633 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF771Q7L3S4 317 aaPredicted RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CATSPER4Q7RTX7 472 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PIWIL4Q7Z3Z4 852 aaKnown RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SPATA21Q7Z572 469 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ISCA2Q86U28 154 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF329Q86UD4 541 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 TMEM173Q86WV6 379 aaPredicted RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SIAH3Q8IW03 269 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CTAGE4Q8IX94 777 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 C4orf19Q8IY42 314 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF595Q8IYB9 648 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CNPY4Q8N129 248 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 NHLRC2Q8NBF2 726 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 OR7G3Q8NG95 312 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PSMA8Q8TAA3 256 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 OCC1Q8TAD7 63 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF473Q8WTR7 871 aaKnown RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 CENPTQ96BT3 561 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 TBC1D31Q96DN5 1066 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 PRMT6Q96LA8 375 aaPredicted RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 DOCK7Q96N67 2140 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF558Q96NG5 402 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 MUS81Q96NY9 551 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SEPHS2Q99611 448 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ASCL2Q99929 193 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SPXQ9BT56 116 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF350Q9GZX5 532 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 MIS12Q9H081 205 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 WNT5BQ9H1J7 359 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 FZD8Q9H461 694 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 HHATLQ9HCP6 504 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms