RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MAGIXQ9H6Y5 334 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 NT5MQ9NPB1 228 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 FKBP14Q9NWM8 211 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 PSORS1C1Q9UIG5 152 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ARL5AQ9Y689 179 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 SBF1O95248 1867 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 NUP214P35658 2090 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 A0A0G2JMZ2 1700 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 LRRC37A2A6NM11 1700 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 CCDC182A6NF36 153 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 E5RI56 91 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 MRPS14O60783 128 aaKnown RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 RHOBTB1O94844 696 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ADORA3P0DMS8 318 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TGFB3P10600 412 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 AKT1P31749 480 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TIE1P35590 1138 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TGM4P49221 684 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 KYAT1Q16773 422 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 C18orf21Q32NC0 220 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 COQ8BQ96D53 544 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 KLHL5Q96PQ7 755 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 HDHD5Q9BXW7 423 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ABCB8Q9NUT2 735 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 MPP6Q9NZW5 540 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 SAMHD1Q9Y3Z3 626 aaKnown RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 PCDHGA6Q9Y5G7 932 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 SHOXO15266 292 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 B3GALT4O96024 378 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 EGFRP00533 1210 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 C1QCP02747 245 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 POU3F3P20264 500 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-210ENST00000493582 MYL9P24844 172 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 PTGS2P35354 604 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 NRIP1P48552 1158 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 PIK3CGP48736 1102 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 LIMK1P53667 647 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 RPL38P63173 70 aaKnown RBP11.41□□□□□ -0.58
HDAC4-210ENST00000493582 HOXC5Q00444 222 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ABRAXAS2Q15018 415 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ZNF79Q15937 498 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 SETMARQ53H47 684 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-210ENST00000493582 RUNDC3AQ59EK9 446 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 GNASQ5JWF2 1037 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 VTCN1Q7Z7D3 282 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 OR13C4Q8NGS5 318 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 SETD6Q8TBK2 473 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 KCTD13Q8WZ19 329 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 AASDHPPTQ9NRN7 309 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ZMYM5Q9UJ78 669 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
HDAC4-210ENST00000493582 POLHQ9Y253 713 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 FNDC1Q4ZHG4 1894 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-210ENST00000493582 MROH6A6NGR9 719 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 LDB2O43679 373 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ITGB1P05556 798 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 CDK1P06493 297 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 SLC10A3P09131 477 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 HK3P52790 923 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 VLDLRP98155 873 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 DSC2Q02487 901 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 HYAL2Q12891 473 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 CAMK2GQ13555 558 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-210ENST00000493582 BTBD16Q32M84 506 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 TOR2AQ5JU69 321 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 PRAMEF18Q5VWM3 479 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ARMCX2Q7L311 632 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ANKRD46Q86W74 232 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 RIOX2Q8IUF8 465 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 LAX1Q8IWV1 398 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 BLOC1S5Q8TDH9 187 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 C12orf10Q9HB07 376 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ARNT2Q9HBZ2 717 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 C1orf109Q9NX04 203 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 ZNF490Q9ULM2 529 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-210ENST00000493582 VPS4AQ9UN37 437 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 TRAPPC4Q9Y296 219 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 V9GYH0 126 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 SSC5DA1L4H1 1573 aa11.41□□□□□ -0.58
HDAC4-210ENST00000493582 EFCAB10A6NFE3 127 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 B4DXG7 233 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 H3BM21 787 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 MUSKO15146 869 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 ARHGEF9O43307 516 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 GJB3O75712 270 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 PGRP06401 933 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 ERP29P30040 261 aaKnown RBP11.4□□□□□ -0.58
HDAC4-210ENST00000493582 RPS5P46782 204 aaKnown RBP11.4□□□□□ -0.58
HDAC4-210ENST00000493582 AP2S1P53680 142 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-210ENST00000493582 ZNF33AQ06730 810 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 TAC4Q86UU9 113 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 PAF1Q8N7H5 531 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 FLCNQ8NFG4 579 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 VANGL1Q8TAA9 524 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-210ENST00000493582 ASB15Q8WXK1 588 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 PMEPA1Q969W9 287 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 SLC39A13Q96H72 371 aa11.4□□□□□ -0.58
HDAC4-210ENST00000493582 OR5M11Q96RB7 305 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms