RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ZFAND4Q86XD8 727 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 PPP1R3BQ86XI6 285 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 RASGRP3Q8IV61 690 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 C19orf47Q8N9M1 422 aaKnown RBP12.34□□□□□ -0.43
CLIP2-209ENST00000493166 FLVCR1-AS1Q8TAF5 88 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 HMGCLL1Q8TB92 370 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 MCOLN3Q8TDD5 553 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 CYTH2Q99418 400 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 GPR22Q99680 433 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 DPH1Q9BZG8 443 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 CAB39LQ9H9S4 337 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 POPDC3Q9HBV1 291 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 FGF21Q9NSA1 209 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.34□□□□□ -0.43
CLIP2-209ENST00000493166 ADAMTS6Q9UKP5 1117 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 RARRES3Q9UL19 164 aa12.34□□□□□ -0.43
CLIP2-209ENST00000493166 MTO1Q9Y2Z2 717 aaKnown RBP12.34□□□□□ -0.43
CLIP2-209ENST00000493166 A0A087WV48 116 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SLC16A5O15375 505 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 KLK10O43240 276 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 FAM155BO75949 473 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SLC16A8O95907 504 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 LIPCP11150 499 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 FGF5P12034 268 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 PSMB5P28074 263 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 OAS2P29728 719 aaKnown RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 TUBB4BP68371 445 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 TSTA3Q13630 321 aaPredicted RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 FASTKQ14296 549 aaKnown RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SF1Q15637 639 aaKnown RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 GPR19Q15760 415 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 UBAP2Q5T6F2 1119 aaKnown RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 CEP97Q8IW35 865 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SPACA3Q8IXA5 215 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 FAM20CQ8IXL6 584 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SYTL1Q8IYJ3 562 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 NKAPQ8N5F7 415 aaKnown RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SMPDL3AQ92484 453 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 MRRFQ96E11 262 aaKnown RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 TCTN2Q96GX1 697 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 ULBP3Q9BZM4 244 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 ACSS3Q9H6R3 686 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 PARVBQ9HBI1 364 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 SYTL2Q9HCH5 934 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 GPAMQ9HCL2 828 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 INTS7Q9NVH2 962 aaKnown RBP12.33□□□□□ -0.44
CLIP2-209ENST00000493166 PDE10AQ9Y233 779 aa12.33□□□□□ -0.44
CLIP2-209ENST00000493166 AHCTF1Q8WYP5 2266 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 PRICKLE3O43900 615 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 STK17BO94768 372 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 FKBP9O95302 570 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 HIST1H2AGP0C0S8 130 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 STMN1P16949 149 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 HIST1H2ADP20671 130 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 MAGP20916 626 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 RPA3P35244 121 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 RAB10P61026 200 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 CLN3Q13286 438 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 PHKG1Q16816 387 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 BROXQ5VW32 411 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 SUSD1Q6UWL2 747 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 TMEM207Q6UWW9 146 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 GSPT2Q8IYD1 628 aaKnown RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 PPFIBP2Q8ND30 876 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 ZNF480Q8WV37 535 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 DLG3Q92796 817 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 N4BP2L2Q92802 583 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 PDLIM5Q96HC4 596 aaKnown RBP12.32□□□□□ -0.44
CLIP2-209ENST00000493166 HIST1H2AHQ96KK5 128 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 MIPEPQ99797 713 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 HIST1H2AJQ99878 128 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 H2AFJQ9BTM1 129 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 FUT8Q9BYC5 575 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 TRIM54Q9BYV2 358 aa12.32□□□□□ -0.44
CLIP2-209ENST00000493166 A0A087WUV0 522 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 A0A1W2PPV9 198 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 NPEPPSL1A6NEC2 478 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 TMEM150CB9EJG8 249 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 PHGDHO43175 533 aaKnown RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 KIAA0754O94854 1291 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 SLU7O95391 586 aaKnown RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ENO2P09104 434 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 MSL3P1P0C860 447 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 IMPA1P29218 277 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 CMPK1P30085 196 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ATP1A2P50993 1020 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 PMS2P54278 862 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 AP1S2P56377 157 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 TGIF1Q15583 401 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ZIC1Q15915 447 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 DEFB110Q30KQ9 67 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 THEMIS2Q5TEJ8 643 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 KIAA1614Q5VZ46 1190 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 MBOAT1Q6ZNC8 495 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms